RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PRAMEF13Q5VWM6 474 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 DUS1LQ6P1R4 473 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 TMIGD1Q6UXZ0 262 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TRMT11Q7Z4G4 463 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 SLC30A8Q8IWU4 369 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ZNF540Q8NDQ6 660 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 GIPC3Q8TF64 312 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 RHNO1Q9BSD3 238 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ZNF717Q9BY31 904 aaPredicted RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 HDAC8Q9BY41 377 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 FKBP14Q9NWM8 211 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 WBP11Q9Y2W2 641 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 RWDD3Q9Y3V2 267 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PCYT1BQ9Y5K3 369 aaPredicted RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 CORINQ9Y5Q5 1042 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 OR2A25A4D2G3 310 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 OTOL1A6NHN0 477 aaPredicted RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 TNFRSF11BO00300 401 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 MAGEB3O15480 346 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 SULT1C4O75897 302 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 SEMA3DO95025 777 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ZBTB11O95625 1053 aaPredicted RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 TBX6O95947 436 aaPredicted RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 GBAP04062 536 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 KLK1P06870 262 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ARAFP10398 606 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 MAP2K4P45985 399 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 SLC6A11P48066 632 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 IL1RL1Q01638 556 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ARHGAP19Q14CB8 494 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 MICAQ29983 383 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ADPRMQ3LIE5 342 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ZNF605Q86T29 641 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 SLC9B2Q86UD5 537 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 LMNTD1Q8N9Z9 388 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 CHPT1Q8WUD6 406 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 RAD51AP1Q96B01 352 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 FEVQ99581 238 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 TAAR2Q9P1P5 351 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 DPP7Q9UHL4 492 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 RNF6Q9Y252 685 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 TRANK1O15050 2925 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 CDH23Q9H251 3354 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ARRDC5A6NEK1 342 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 SAP18O00422 153 aaKnown RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 TLL1O43897 1013 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 FAM20BO75063 409 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 NFATC1O95644 943 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ANXA8P13928 327 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ITGA2P17301 1181 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 KELP23276 732 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 TPP2P29144 1249 aaPredicted RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 XCR1P46094 333 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 CDK6Q00534 326 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 KCNC4Q03721 635 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ZNF697Q5TEC3 545 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 P2RY8Q86VZ1 359 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 RNF130Q86XS8 419 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 DCUN1D3Q8IWE4 304 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ZNF740Q8NDX6 193 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 NFKBIDQ8NI38 313 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 SPPL2AQ8TCT8 520 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 MIPOL1Q8TD10 442 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 GEMIN6Q8WXD5 167 aaKnown RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 UBE2FQ969M7 185 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ARMC5Q96C12 935 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 ZNF764Q96H86 408 aaPredicted RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 SH3YL1Q96HL8 342 aaPredicted RBP9.02□□□□□ -0.97
PDPN-212ENST00000621990 MENTQ9BUN1 341 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 RUBCNLQ9H714 662 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 WASH6PQ9NQA3 447 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 POFUT2Q9Y2G5 429 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 PCDHGA2Q9Y5H1 932 aa9.02□□□□□ -0.97
PDPN-212ENST00000621990 A0A1W2PRB8 838 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 LINC01553A4QN01 128 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 CLDN24A6NM45 220 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
PDPN-212ENST00000621990 CBFA2T3O75081 653 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 KRT75O95678 551 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 IFNA14P01570 189 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 IL3P08700 152 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 GABRB1P18505 474 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 TGFBR2P37173 567 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 VIPR2P41587 438 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 ST13P50502 369 aaKnown RBP9.01□□□□□ -0.97
PDPN-212ENST00000621990 MEF2AQ02078 507 aaPredicted RBP9.01□□□□□ -0.97
PDPN-212ENST00000621990 ZNF234Q14588 700 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 CYP2A13Q16696 494 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 TMEM240Q5SV17 173 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 DCDC5Q6ZRR9 648 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 ARMC8Q8IUR7 673 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 KRT78Q8N1N4 520 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 SLC5A8Q8N695 610 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 NATD1Q8N6N6 113 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 OR10G2Q8NGC3 310 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 RHOXF1Q8NHV9 184 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PHOSPHO2Q8TCD6 241 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 FCGR1BQ92637 280 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 DNASE1L2Q92874 299 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms