RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 TMPRSS9Q7Z410 1059 aa17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 NT5CQ8TCD5 201 aa17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 TRIM8Q9BZR9 551 aa17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 PRDM7Q9NQW5 492 aa17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 AHSPQ9NZD4 102 aa17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 PRPF19Q9UMS4 504 aaKnown RBP17.7■□□□□ 0.42
SEMA6C-210ENST00000621728 TLCD2A6NGC4 264 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 DUX1O43812 170 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 PCDHGA12O60330 932 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 SORBS2O94875 1100 aaKnown RBP17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 IL3P08700 152 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 EFNA1P20827 205 aaPredicted RBP17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 GSTM2P28161 218 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 CAPRIN1Q14444 709 aaKnown RBP17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 TMEM35AQ53FP2 167 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 APLFQ8IW19 511 aaPredicted RBP17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 FAM181AQ8N9Y4 354 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 OR2L5Q8NG80 312 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 WDR41Q9HAD4 459 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 EPHA6Q9UF33 1036 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 CROCCQ5TZA2 2017 aa17.69■□□□□ 0.42
SEMA6C-210ENST00000621728 BBIP1A8MTZ0 92 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 MAP3K7O43318 606 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PGRP06401 933 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 SLC35G6P0C7Q6 338 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PIM1P11309 404 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PRPS1L1P21108 318 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 CERS1P27544 350 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 SEPHS1P49903 392 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 ATXN3P54252 364 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 C2orf80Q0P641 193 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 KCNAB1Q14722 419 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PRSS53Q2L4Q9 553 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 OR4F3Q6IEY1 312 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 C16orf89Q6UX73 402 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 ANKRD46Q86W74 232 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 NUDT13Q86X67 352 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 DNAJC22Q8N4W6 341 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 GLB1L3Q8NCI6 653 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 UTP15Q8TED0 518 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 UCN3Q969E3 161 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 RERGQ96A58 199 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 ZDHHC12Q96GR4 267 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 CENPKQ9BS16 269 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 RAB33BQ9H082 229 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 RXFP3Q9NSD7 469 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 SOHLH2Q9NX45 425 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 LRCH1Q9Y2L9 728 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 A0A0A6YYD5 115 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 EME2A4GXA9 379 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 GABRR3A8MPY1 467 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 A8MU76 341 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 FXYD1O00168 92 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 SCAMP2O15127 329 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 LAMP1P11279 417 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 COX7A2P14406 83 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 MAPK12P53778 367 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 CCL7P80098 99 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 RGS1Q08116 209 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PWP1Q13610 501 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PROX2Q3B8N5 592 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 ZNF385BQ569K4 471 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 LAIR1Q6GTX8 287 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 FAM71E1Q6IPT2 247 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PRSS41Q7RTY9 318 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 MCATQ8IVS2 390 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 SHISA5Q8N114 240 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PRSS33Q8NF86 280 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 TSPEARQ8WU66 669 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 OR52E6Q96RD3 313 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 CCDC3Q9BQI4 270 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 DDX31Q9H8H2 851 aaKnown RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 MYNNQ9NPC7 610 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 TMEM45AQ9NWC5 275 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 TEX10Q9NXF1 929 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 BCAP29Q9UHQ4 241 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 LEF1Q9UJU2 399 aaPredicted RBP17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 PCDHGA7Q9Y5G6 932 aa17.68■□□□□ 0.42
SEMA6C-210ENST00000621728 SPTBP11277 2137 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 DNAJB6O75190 326 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 PDE5AO76074 875 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 ANPEPP15144 967 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 ATP5A1P25705 553 aaKnown RBP17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 S100A3P33764 101 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 ASMTP46597 345 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 STXBP1P61764 594 aaKnown RBP17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 BTN3A2P78410 334 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 GPLD1P80108 840 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 RELAQ04206 551 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 TCF15Q12870 199 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 BLMHQ13867 455 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 FAM180BQ6P0A1 224 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 TRIM40Q6P9F5 258 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 PAGE2Q7Z2X7 111 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 TMEM132CQ8N3T6 1108 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 DTWD1Q8N5C7 304 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 CSNK1A1LQ8N752 337 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 SUMF1Q8NBK3 374 aa17.67■□□□□ 0.42
SEMA6C-210ENST00000621728 TESCQ96BS2 214 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms