RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZNF446Q9NWS9 450 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PADI2Q9Y2J8 665 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 BOD1L1Q8NFC6 3051 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 SAP18O00422 153 aaKnown RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 RTCAO00442 366 aaKnown RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PLPP1O14494 284 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 TM9SF1O15321 606 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PDYNP01213 254 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 XCR1P46094 333 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 SERPINB4P48594 390 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PKNOX1P55347 436 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 BTN3A2P78410 334 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 RUNX2Q13950 521 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 DEPDC1Q5TB30 811 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 TRIM40Q6P9F5 258 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 REPS1Q96D71 796 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 HBEGFQ99075 208 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 MID1IP1Q9NPA3 183 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 MKKSQ9NPJ1 570 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PSD3Q9NYI0 1048 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 TIMM22Q9Y584 194 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 DOCK10Q96BY6 2186 aa13.52□□□□□ -0.24
CBWD3-217ENST00000621474 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 OR2W5A6NFC9 320 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 SCELO95171 688 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 CHRNGP07510 517 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 CD63P08962 238 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 CERS1P27544 350 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 FOLR3P41439 243 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 HTR6P50406 440 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 NAA20P61599 178 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 OCA2Q04671 838 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 SSPNQ14714 243 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 PRSS58Q8IYP2 241 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 CA13Q8N1Q1 262 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 ZSCAN1Q8NBB4 408 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 MIEF2Q96C03 454 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 PEX11GQ96HA9 241 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 MAGEB10Q96LZ2 347 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-217ENST00000621474 KCNC2Q96PR1 638 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 SORBS1Q9BX66 1292 aaKnown RBP13.52□□□□□ -0.25
CBWD3-217ENST00000621474 RBCK1Q9BYM8 510 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 SHCBP1LQ9BZQ2 653 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 MLXIPLQ9NP71 852 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 LANCL2Q9NS86 450 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.25
CBWD3-217ENST00000621474 UQCRHLA0A096LP55 91 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 CDC14CA4D256 554 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 CHST10O43529 356 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 ZWINTO95229 277 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 UQCRHP07919 91 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 WDR4P57081 412 aaKnown RBP13.51□□□□□ -0.25
CBWD3-217ENST00000621474 MC1RQ01726 317 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 CUL3Q13618 768 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 TMEM35AQ53FP2 167 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 CFAP157Q5JU67 520 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
CBWD3-217ENST00000621474 AGBL2Q5U5Z8 902 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 NIPAL1Q6NVV3 410 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 CHSY3Q70JA7 882 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 GPR155Q7Z3F1 870 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 PPP1R32Q7Z5V6 425 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 STMN4Q9H169 189 aaPredicted RBP13.51□□□□□ -0.25
CBWD3-217ENST00000621474 ELOVL6Q9H5J4 265 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 KCNK9Q9NPC2 374 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 STK38LQ9Y2H1 464 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 HS3ST3B1Q9Y662 390 aa13.51□□□□□ -0.25
CBWD3-217ENST00000621474 IDSB3KWA1 339 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MANBAO00462 879 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SOCS6O14544 535 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 NPHS1O60500 1241 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ENO1P06733 434 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MMP11P24347 488 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ATP5A1P25705 553 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 PTX3P26022 381 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 HPDP32754 393 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 BSGP35613 385 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SLC18A1P54219 525 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 IFT88Q13099 833 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ABRAXAS2Q15018 415 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SGO1Q5FBB7 561 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MED25Q71SY5 747 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MRGPREQ86SM8 312 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ACOT4Q8N9L9 421 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 METTL6Q8TCB7 284 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SELENOMQ8WWX9 145 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TTC9Q92623 222 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CNDP1Q96KN2 507 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 OR1F2PQ96R84 312 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TBCDQ9BTW9 1192 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CRB3Q9BUF7 120 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SLC29A3Q9BZD2 475 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms