RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MRRFQ96E11 262 aaKnown RBP16.1■□□□□ 0.17
HMGN3-203ENST00000620514 C16orf45Q96MC5 204 aaPredicted RBP16.1■□□□□ 0.17
HMGN3-203ENST00000620514 SIGLEC12Q96PQ1 595 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 CAPS2Q9BXY5 557 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 NT5DC2Q9H857 520 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 CNOT10Q9H9A5 744 aaKnown RBP16.1■□□□□ 0.17
HMGN3-203ENST00000620514 IGSF5Q9NSI5 407 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 ZDHHC18Q9NUE0 388 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 COPG2Q9UBF2 871 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 ZNF490Q9ULM2 529 aaPredicted RBP16.1■□□□□ 0.17
HMGN3-203ENST00000620514 ZGRF1Q86YA3 2104 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 IGKV3D-11A0A0A0MRZ8 115 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 TCRBV16S1A1N1A0A5B0 115 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 LRIT2A6NDA9 550 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 A8MUA0 341 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 ERI3O43414 337 aaKnown RBP16.09■□□□□ 0.17
HMGN3-203ENST00000620514 CCNT2O60583 730 aaKnown RBP16.09■□□□□ 0.17
HMGN3-203ENST00000620514 RASAL1O95294 804 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 CLDN1O95832 211 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 MST1P26927 711 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 KCNK10P57789 538 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
HMGN3-203ENST00000620514 TUBA3CQ13748 450 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 BMPR2Q13873 1038 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 INAQ16352 499 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 PDK4Q16654 411 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 MEP1AQ16819 746 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 XKR6Q5GH73 641 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 ZNF766Q5HY98 468 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 C8orf74Q6P047 294 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 TUBA3EQ6PEY2 450 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 ISCA2Q86U28 154 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 SUN3Q8TAQ9 357 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 ELP5Q8TE02 316 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 WDR34Q96EX3 536 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 FAR2Q96K12 515 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 QRFPRQ96P65 431 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 HES7Q9BYE0 225 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 EHD1Q9H4M9 534 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 PRDM9Q9NQV7 894 aa16.09■□□□□ 0.17
HMGN3-203ENST00000620514 NBPF19A0A087WUL8 3843 aa16.08■□□□□ 0.17
HMGN3-203ENST00000620514 DOPEY1Q5JWR5 2465 aa16.08■□□□□ 0.17
HMGN3-203ENST00000620514 ANKDD1BA6NHY2 528 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 SAGE2PA6NJ88 616 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 GABRR3A8MPY1 467 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 UBXN8O00124 270 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 LRRTM2O43300 516 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 CLEC3AO75596 197 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 WISP2O76076 250 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 S100BP04271 92 aaPredicted RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 CD96P40200 585 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 HNRNPFP52597 415 aaKnown RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 PLA2G16P53816 162 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 NAB1Q13506 487 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 ADPRMQ3LIE5 342 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 SLC5A8Q8N695 610 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 MDS2Q8NDY4 140 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 TMEM52Q8NDY8 209 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 NFAM1Q8NET5 270 aaPredicted RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 STAG3L4Q8TBR4 150 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 NXNL1Q96CM4 212 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 PTCD3Q96EY7 689 aaKnown RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 ATOH8Q96SQ7 321 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 UTP23Q9BRU9 249 aaKnown RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 CD244Q9BZW8 370 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 PITHD1Q9GZP4 211 aaPredicted RBP16.08■□□□□ 0.16
HMGN3-203ENST00000620514 CDCP1Q9H5V8 836 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 NUDT4Q9NZJ9 180 aa16.08■□□□□ 0.16
HMGN3-203ENST00000620514 HMX2A2RU54 273 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 SUPT3HB4E1H0 165 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 TGFBR3LH3BV60 316 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 SUPT3HO75486 399 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 LTA4HP09960 611 aaKnown RBP16.07■□□□□ 0.16
HMGN3-203ENST00000620514 COL8A1P27658 744 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 GSTM2P28161 218 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 CRABP2P29373 138 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 TAS2R50P59544 299 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 IRF9Q00978 393 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 IRF8Q02556 426 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 CHIT1Q13231 466 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 OR1C1Q15619 314 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 MROH9Q5TGP6 573 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF468Q5VIY5 522 aaPredicted RBP16.07■□□□□ 0.16
HMGN3-203ENST00000620514 SPINK14Q6IE38 97 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 LRRC70Q7Z2Q7 622 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 TBC1D1Q86TI0 1168 aaPredicted RBP16.07■□□□□ 0.16
HMGN3-203ENST00000620514 OR2L5Q8NG80 312 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 KCTD4Q8WVF5 259 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 F2RL3Q96RI0 385 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 EFCAB11Q9BUY7 163 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 NPLQ9BXD5 320 aaPredicted RBP16.07■□□□□ 0.16
HMGN3-203ENST00000620514 REXO4Q9GZR2 422 aaKnown RBP16.07■□□□□ 0.16
HMGN3-203ENST00000620514 NMRAL1Q9HBL8 299 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 KLHL1Q9NR64 748 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 ABI3Q9P2A4 366 aa16.07■□□□□ 0.16
HMGN3-203ENST00000620514 B3GALT2O43825 422 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 KERAO60938 352 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 STSP08842 583 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms