RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HSD17B13Q7Z5P4 300 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 CCDC71Q8IV32 467 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 BVESQ8NE79 360 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 FBXO30Q8TB52 745 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 NTAN1Q96AB6 310 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 NXPE2Q96DL1 559 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZBED6CLQ96FA7 236 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 MSLNLQ96KJ4 702 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 SLC2A13Q96QE2 648 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 GFM1Q96RP9 751 aaKnown RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 ASPNQ9BXN1 380 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 KCNH6Q9H252 994 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 MIXL1Q9H2W2 232 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 FBXW11Q9UKB1 542 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 UTS2RQ9UKP6 389 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 PCDHGB7Q9Y5F8 929 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 UBA6A0AVT1 1052 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 CLCA1A8K7I4 914 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 LYRM1O43325 122 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 LGI1O95970 557 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 IGHV2-70P01814 119 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ADRB1P08588 477 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 FGF4P08620 206 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ACAA1P09110 424 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 PSMA3P25788 255 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 TSPAN7P41732 249 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 CHRNA4P43681 627 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ARFIP1P53367 373 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 NUBP1P53384 320 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 TP53BP2Q13625 1128 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 KLHL22Q53GT1 634 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZNF678Q5SXM1 525 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 MORN1Q5T089 497 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 CPZQ66K79 652 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 SLC6A19Q695T7 634 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 FAM180BQ6P0A1 224 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 NOTUMQ6P988 496 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 BHLHB9Q6PI77 547 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 GDPGP1Q6ZNW5 385 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 KRT74Q7RTS7 529 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 MCATQ8IVS2 390 aaKnown RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 ENTHD1Q8IYW4 607 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DCBLD1Q8N8Z6 715 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 B3GALNT2Q8NCR0 500 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 C19orf18Q8NEA5 215 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 UCN3Q969E3 161 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 MED10Q9BTT4 135 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ULBP1Q9BZM6 244 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 MED28Q9H204 178 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 RASSF1Q9NS23 344 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 TMEM45AQ9NWC5 275 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 OR12D3Q9UGF7 316 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 STUB1Q9UNE7 303 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DNAJC15Q9Y5T4 150 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 SMIM28A0A1B0GU29 152 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 FAM74A7A6NL05 159 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 YJEFN3A6XGL0 299 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 MEIS3P2A8K0S8 358 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 EFCAB7A8K855 629 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 AIPO00170 330 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PIP5K1BO14986 540 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 HPGDSO60760 199 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 ANXA9O76027 345 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PTHP01270 115 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 TSPAN19P0C672 248 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 IL1RNP18510 177 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 HOXA6P31267 233 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 HOXA9P31269 272 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 CASP2P42575 452 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PSEN2P49810 448 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PSMD4P55036 377 aaKnown RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 SH3BP2P78314 561 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 SCAPQ12770 1279 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 EIF4HQ15056 248 aaKnown RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 ZNF528Q3MIS6 628 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 FAM74A3Q4VXF1 159 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 UNC50Q53HI1 259 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PYDC2Q56P42 97 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 UBXN11Q5T124 520 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 ALKAL1Q6UXT8 129 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 KIAA0907Q7Z7F0 614 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 PGBD3Q8N328 593 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 DNAJC22Q8N4W6 341 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 ZNF655Q8N720 491 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 EFHBQ8N7U6 833 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 WDR36Q8NI36 951 aaKnown RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 POP5Q969H6 163 aaKnown RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 ZDHHC12Q96GR4 267 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 MED18Q9BUE0 208 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PTDSS2Q9BVG9 487 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PAPOLGQ9BWT3 736 aaKnown RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 SORBS1Q9BX66 1292 aaKnown RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 FSD1LQ9BXM9 530 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 MID1IP1Q9NPA3 183 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 EVLQ9UI08 416 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 SLC6A14Q9UN76 642 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 CDH10Q9Y6N8 788 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms