RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 U3KQ87 197 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 PRR23D1E9PI22 279 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 SLC28A1O00337 649 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 STX16O14662 325 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 PCDH17O14917 1159 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 OR10H3O60404 316 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 RAMP2O60895 175 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 PRR23D2P0DMB1 279 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 HOXB8P17481 243 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 PNPLA4P41247 253 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ARHGAP1Q07960 439 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 MGAT3Q09327 533 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 SCAPQ12770 1279 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 AANATQ16613 207 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 DCAF4L1Q3SXM0 396 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ALFQ53S48 1182 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 TCTE3Q8IZS6 198 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 RDH10Q8IZV5 341 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 TCEANCQ8N8B7 351 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 KCTD7Q96MP8 289 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 POLR1EQ9GZS1 481 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ABCG5Q9H222 651 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 RBFOX1Q9NWB1 397 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 SEC14L4Q9UDX3 406 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 FZD4Q9ULV1 537 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 GSTK1Q9Y2Q3 226 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 BNIP3LO60238 219 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ACPPP15309 386 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 EDNRBP24530 442 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 DNASE1P24855 282 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 SOAT1P35610 550 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 GSTM5P46439 218 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 CLCN4P51793 760 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 EPHA5P54756 1037 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 PER3P56645 1201 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 DSTNP60981 165 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 RPS7P62081 194 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 DEFA5Q01523 94 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ATAT1Q5SQI0 421 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 LAMTOR1Q6IAA8 161 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 MTFR2Q6P444 385 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 SHFQ7M4L6 423 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 CELF5Q8N6W0 485 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 GPR152Q8TDT2 470 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 USP7Q93009 1102 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 UPRTQ96BW1 309 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 SGTBQ96EQ0 304 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZBED6CLQ96FA7 236 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 CPPED1Q9BRF8 314 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 CIPCQ9C0C6 399 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZNF226Q9NYT6 803 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 ADAM30Q9UKF2 790 aa9.4□□□□□ -0.9
TNFAIP3-210ENST00000620204 A0A075B6Q4 140 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 FGF10O15520 208 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 CFL1P23528 166 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 ACVRL1P37023 503 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 FLT3LGP49771 235 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 EXOSC2Q13868 293 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 GRK1Q15835 563 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC14A2Q15849 920 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 PLAG1Q6DJT9 500 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 FRMPD2BQ6IN97 320 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 METTL2BQ6P1Q9 378 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 C17orf107Q6ZR85 190 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 USP45Q70EL2 814 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 PRSS42Q7Z5A4 293 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 IFNL1Q8IU54 200 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 SRFBP1Q8NEF9 429 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 GPR156Q8NFN8 814 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 C9orf43Q8TAL5 461 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 GTF3C2Q8WUA4 911 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC5A11Q8WWX8 675 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 C11orf24Q96F05 449 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 TMEM80Q96HE8 168 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 C12orf66Q96MD2 445 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 TMED9Q9BVK6 235 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 NXF2Q9GZY0 626 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 KCNH6Q9H252 994 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 HCN2Q9UL51 889 aa9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 RBBP6Q7Z6E9 1792 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-210ENST00000620204 WNT9AO14904 365 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 B3GAT3O94766 335 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 IGFBP1P08833 259 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 LHCGRP22888 699 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 RGS4P49798 205 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TIAL1Q01085 375 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 CRYZQ08257 329 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 BICRALQ6AI39 1079 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 GATAD2BQ8WXI9 593 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TTC9Q92623 222 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 RNFT2Q96EX2 444 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZFP3Q96NJ6 502 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 GPR63Q9BZJ6 419 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TPT1P8Q9HAU6 139 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms