RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	FAM120C	Q9NX05	1096 aa	Known RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644		A0A1W2PRU2	124 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	ERVH48-1	M5A8F1	160 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	GFRA2	O00451	464 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	ETV6	P41212	452 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	CSTF3	Q12996	717 aa	Known RBP	13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	EXOC3L2	Q2M3D2	409 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	LYPD8	Q6UX82	237 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	TMEM150A	Q86TG1	271 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	CACTIN-AS1	Q8N1I8	211 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	L3MBTL4	Q8NA19	623 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	JPH3	Q8WXH2	748 aa	Predicted RBP	13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	CLP1	Q92989	425 aa	Known RBP	13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	OR2A14	Q96R47	310 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	DOHH	Q9BU89	302 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	SLA2	Q9H6Q3	261 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	GRIP1	Q9Y3R0	1128 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	ARHGEF33	A8MVX0	844 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	CTDSP2	O14595	271 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	HOXA2	O43364	376 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	ZNF821	O75541	412 aa	Predicted RBP	13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	C6orf47	O95873	294 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	SLC16A8	O95907	504 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	C1S	P09871	688 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	HLA-E	P13747	358 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	SLC6A12	P48065	614 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	SPINT3	P49223	89 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	KCNJ10	P78508	379 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	UAP1L1	Q3KQV9	507 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644		Q5BKY6	102 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	SZRD1	Q7Z422	152 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	PEX5L	Q8IYB4	626 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	GGH	Q92820	318 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	IL4I1	Q96RQ9	567 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	MS4A12	Q9NXJ0	267 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	SLC6A14	Q9UN76	642 aa		13.89	□□□□□ -0.19
SMTN-223	ENST00000619644	NEDD8-MDP1	E9PL57	170 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SCAMP2	O15127	329 aa	Known RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	TSPAN6	O43657	245 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	PTH	P01270	115 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SLAMF1	Q13291	335 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	GPNMB	Q14956	572 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	WDR45B	Q5MNZ6	344 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	C22orf39	Q6P5X5	142 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	OTOP2	Q7RTS6	562 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	ZNF438	Q7Z4V0	828 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	RAB43	Q86YS6	212 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	CYP4Z2P	Q8N1L4	340 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	HUS1B	Q8NHY5	278 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SORCS1	Q8WY21	1168 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	TRIM63	Q969Q1	353 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	TBC1D20	Q96BZ9	403 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	PITX2	Q99697	317 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SLC35A5	Q9BS91	424 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	CCDC32	Q9BV29	185 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	OR51B5	Q9H339	312 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	FAM83D	Q9H4H8	585 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	ELAC1	Q9H777	363 aa	Known RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	TMPRSS11E	Q9UL52	423 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SCN2B	O60939	215 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	CHRM5	P08912	532 aa	Predicted RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SLC10A3	P09131	477 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	DAB2	P98082	770 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	GRPEL2	Q8TAA5	225 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	TMCO6	Q96DC7	493 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	RIOK2	Q9BVS4	552 aa	Known RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	RPRD1B	Q9NQG5	326 aa	Known RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	PSORS1C1	Q9UIG5	152 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	FAM227A	F5H4B4	570 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	TFEC	O14948	347 aa	Predicted RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	HLA-F	P30511	346 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SOX6	P35712	828 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	PIK3CB	P42338	1070 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	CBARP	Q8N350	705 aa	Predicted RBP	13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	RNF170	Q96K19	258 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	GDF15	Q99988	308 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	SLC30A2	Q9BRI3	323 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	CCM2	Q9BSQ5	444 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	ACAT2	Q9BWD1	397 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	NDUFAF4	Q9P032	175 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	INSL5	Q9Y5Q6	135 aa		13.88	□□□□□ -0.19
SMTN-223	ENST00000619644	ZSCAN5B	A6NJL1	495 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	ARHGAP33	O14559	1287 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	KPNA5	O15131	536 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	ADAMDEC1	O15204	470 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	UROD	P06132	367 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	HOXB6	P17509	224 aa	Known RBP	13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	RFX2	P48378	723 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	HBA1	P69905	142 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	GPLD1	P80108	840 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	MTAP	Q13126	283 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	MPPE1	Q53F39	396 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	VN1R5	Q7Z5H4	357 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	HRASLS5	Q96KN8	279 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	C7orf34	Q96L11	122 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	SAMD11	Q96NU1	681 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	VPS35	Q96QK1	796 aa		13.87	□□□□□ -0.19
SMTN-223	ENST00000619644	TMEM175	Q9BSA9	504 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms