RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GFOD2Q3B7J2 385 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ANKRD54Q6NXT1 300 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 SYCE2Q6PIF2 218 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 THNSL2Q86YJ6 484 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 GALNT13Q8IUC8 556 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ZZZ3Q8IYH5 903 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 NXPE1Q8N323 547 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CAMKK1Q8N5S9 505 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 Q8N9G6 341 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 YIPF6Q96EC8 236 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF300Q96RE9 604 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 KCNS3Q9BQ31 491 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 KXD1Q9BQD3 176 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 C1QTNF3Q9BXJ4 246 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 DUSP21Q9H596 190 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 SUV39H2Q9H5I1 410 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC52A3Q9NQ40 469 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 RPRD1BQ9NQG5 326 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 LYVE1Q9Y5Y7 322 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CDH23Q9H251 3354 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 BLACEA4D250 179 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CLIC1O00299 241 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TNFRSF11BO00300 401 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 MANBAO00462 879 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC25A14O95258 325 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 BCKDHAP12694 445 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 AQP1P29972 269 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 HNF4AP41235 474 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC6A11P48066 632 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 PRIM2P49643 509 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 NUDT6P53370 316 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 NKG7Q16617 165 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 FNDC3BQ53EP0 1204 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TM4SF20Q53R12 229 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 PDZK1Q5T2W1 519 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM151BQ6UXP7 276 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF517Q6ZMY9 492 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CYP4Z1Q86W10 505 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CHST14Q8NCH0 376 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 MDGA1Q8NFP4 955 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF675Q8TD23 568 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 UBASH3BQ8TF42 649 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TADA1Q96BN2 335 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 COL21A1Q96P44 957 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 KCNC2Q96PR1 638 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TRIB3Q96RU7 358 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TRIM39Q9HCM9 518 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 RABL2AQ9UBK7 228 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 SPASTQ9UBP0 616 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ITM2BQ9Y287 266 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 KLHL20Q9Y2M5 609 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 NYNRINQ9P2P1 1898 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 KRT87PA6NCN2 255 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CCDC182A6NF36 153 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 MAGEB17A8MXT2 336 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CENPBD1B2RD01 187 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 HAT1O14929 419 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ADAMDEC1O15204 470 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CYP7B1O75881 506 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 WISP3O95389 354 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 EBLN1P0CF75 366 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 GDI1P31150 447 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF140P52738 457 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 IFITM3Q01628 133 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 SPIBQ01892 262 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 FADDQ13158 208 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CCDC157Q569K6 752 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CATSPEREQ5SY80 951 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 PRR23CQ6ZRP0 262 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ADIPOR2Q86V24 386 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 GALNT12Q8IXK2 581 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 LILRB4Q8NHJ6 448 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 GRPEL2Q8TAA5 225 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ISG20Q96AZ6 181 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC30A2Q9BRI3 323 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CARS2Q9HA77 564 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ELOVL2Q9NXB9 296 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 HS3ST2Q9Y278 367 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 DHRS7Q9Y394 339 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 GPSM3Q9Y4H4 160 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 LOC730098B7Z3J9 87 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 KPNA3O00505 521 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ENGP17813 658 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 AZGP1P25311 298 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 IL12RB1P42701 662 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 C1DQ13901 141 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 IER5LQ5T953 404 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 AGAP6Q5VW22 663 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 OR4F3Q6IEY1 312 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CAPN13Q6MZZ7 669 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TMPRSS11AQ6ZMR5 421 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 TMEM179BQ7Z7N9 219 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 PIANPQ8IYJ0 282 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 METTL4Q8N3J2 472 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 PARP16Q8N5Y8 322 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ENKURQ8TC29 256 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 RASSF5Q8WWW0 418 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 RIPOR3Q96MK2 946 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms