RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NLGN4XQ8N0W4 816 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 METTL4Q8N3J2 472 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 ESX1Q8N693 406 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 NLGN4YQ8NFZ3 816 aaPredicted RBP14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 OR5T3Q8NGG3 340 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 OR2T11Q8NH01 316 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 PIWIL2Q8TC59 973 aaKnown RBP14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 CHTF18Q8WVB6 975 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 C3orf30Q96M34 536 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 SERINC2Q96SA4 455 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 YIPF2Q9BWQ6 316 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 NUF2Q9BZD4 464 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 ROGDIQ9GZN7 287 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 CHST8Q9H2A9 424 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 CCDC134Q9H6E4 229 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 COPS7BQ9H9Q2 264 aaPredicted RBP14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 PFDN4Q9NQP4 134 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 SLC22A11Q9NSA0 550 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 VTI1BQ9UEU0 232 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 ACSL6Q9UKU0 697 aa14.8□□□□□ -0.04
PCDHGC3-204ENST00000617222 A0A088AWK7 358 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ATP6AP2A0A1C7CYW4 349 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 H0YIG0 161 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 SEC16AO15027 2179 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 HDAC3O15379 428 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 CHST10O43529 356 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 B3GALT2O43825 422 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 EDF1O60869 148 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 EEDO75530 441 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ATP6AP2O75787 350 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 RSL1D1O76021 490 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ONECUT2O95948 504 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 KLK1P06870 262 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 VIMP08670 466 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 PIM1P11309 404 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ZNF10P21506 573 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 FBLP22087 321 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 HIST1H1TP22492 207 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 CERS1P27544 350 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ARFIP1P53367 373 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 SKP1P63208 163 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 RUNX2Q13950 521 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 NR6A1Q15406 480 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 SYT16Q17RD7 645 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 MLIPQ5VWP3 458 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 COX15Q7KZN9 410 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 CACNA2D3Q8IZS8 1091 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 SHISA5Q8N114 240 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 C1orf52Q8N6N3 182 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ACOT4Q8N9L9 421 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 GATA6Q92908 595 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 FGF11Q92914 225 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 C19orf60Q96EN9 201 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 CCT7Q99832 543 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 DPH2Q9BQC3 489 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 ZNF717Q9BY31 904 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 LRTM1Q9HBL6 345 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 RIC8BQ9NVN3 520 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 HCN3Q9P1Z3 774 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 IFT80Q9P2H3 777 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 TRPC4Q9UBN4 977 aa14.79□□□□□ -0.04
PCDHGC3-204ENST00000617222 PEX11AO75192 247 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 SEC22BO75396 215 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 GBAP04062 536 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 TSFMP43897 325 aaKnown RBP14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 ACSM2AQ08AH3 577 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 DSG2Q14126 1118 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 TGIF1Q15583 401 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 GALNTL6Q49A17 601 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 XKR7Q5GH72 579 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 ACSM2BQ68CK6 577 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 ZNF517Q6ZMY9 492 aaPredicted RBP14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 PAGE2Q7Z2X7 111 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 COMMD6Q7Z4G1 85 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 NUDT13Q86X67 352 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 DTX1Q86Y01 620 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 OR51Q1Q8NH59 317 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 NKD1Q969G9 470 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 TUBGCP3Q96CW5 907 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 CCDC86Q9H6F5 360 aaKnown RBP14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 DDX31Q9H8H2 851 aaKnown RBP14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 CLK4Q9HAZ1 481 aaKnown RBP14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 WDR70Q9NW82 654 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 C1orf109Q9NX04 203 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 GIMAP2Q9UG22 337 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 GPN3Q9UHW5 284 aaPredicted RBP14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 ADAM29Q9UKF5 820 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 USH1CQ9Y6N9 552 aa14.78□□□□□ -0.04
PCDHGC3-204ENST00000617222 A0A0A6YYD5 115 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 TRPC5OSA6NMA1 111 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 C9J4A7 227 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 NPIPB8E9PQR5 432 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 ZNF195O14628 629 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 LSM1O15116 133 aaKnown RBP14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 SCELO95171 688 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 TCN2P20062 427 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 PRPH2P23942 346 aa14.77□□□□□ -0.05
PCDHGC3-204ENST00000617222 TPP2P29144 1249 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms