RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BRF2	Q9HAW0	419 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GPATCH2	Q9NW75	528 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PCDHGA10	Q9Y5H3	936 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C1orf226	A1L170	272 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PIPSL	A2A3N6	862 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	LRRC72	A6NJI9	287 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TNFRSF10A	O00220	468 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SOD1	P00441	154 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ITGAM	P11215	1152 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IL1RN	P18510	177 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IDH2	P48735	452 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CDH12	P55289	794 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZNF763	Q0D2J5	394 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NPRL3	Q12980	569 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CAMK2G	Q13555	558 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	COL9A2	Q14055	689 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GANAB	Q14697	944 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ANXA8L1	Q5VT79	327 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CCDC71	Q8IV32	467 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C11orf65	Q8NCR3	313 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OR5AR1	Q8NGP9	310 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PPCDC	Q96CD2	204 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RSPRY1	Q96DX4	576 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	VPS35	Q96QK1	796 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FEV	Q99581	238 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C11orf49	Q9H6J7	331 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RLIM	Q9NVW2	624 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C5AR2	Q9P296	337 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RHCG	Q9UBD6	479 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DOLK	Q9UPQ8	538 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TPRKB	Q9Y3C4	175 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	EYS	Q5T1H1	3165 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GCM2	O75603	506 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CLPX	O76031	633 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FGB	P02675	491 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C1GALT1C1L	P0DN25	315 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ALDH9A1	P49189	494 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NUDT6	P53370	316 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RPS26	P62854	115 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SPIB	Q01892	262 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRSS53	Q2L4Q9	553 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KIAA1614	Q5VZ46	1190 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HIST2H2AA3	Q6FI13	130 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BTLA	Q7Z6A9	289 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLCO6A1	Q86UG4	719 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZNF547	Q8IVP9	402 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PLA2G15	Q8NCC3	412 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OR9A1P	Q8NGU1	263 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NDNF	Q8TB73	568 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	UTP15	Q8TED0	518 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C7orf34	Q96L11	122 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	REEP4	Q9H6H4	257 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TM7SF3	Q9NS93	570 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SELENON	Q9NZV5	590 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMA7	Q9Y2S6	64 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TNFRSF11B	O00300	401 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ARHGAP33	O14559	1287 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SPINT1	O43278	529 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PCDHGA12	O60330	932 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	LCK	P06239	509 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CISD3	P0C7P0	127 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MYOG	P15173	224 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DDX6	P26196	483 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CD6	P30203	668 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KRT20	P35900	424 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TAP2	Q03519	686 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MOG	Q16653	247 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMEM236	Q5W0B7	351 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ABHD11	Q8NFV4	315 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SPPL3	Q8TCT6	385 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DOHH	Q9BU89	302 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SERTM1	A2A2V5	107 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NPIPB8	E9PQR5	432 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390		M0R3G1	203 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	EFCAB14	O75071	495 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C9	P02748	559 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	STATH	P02808	62 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IL3	P08700	152 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OPRL1	P41146	370 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	WAS	P42768	502 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MASP1	P48740	699 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SCARB2	Q14108	478 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SYT16	Q17RD7	645 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC5A12	Q1EHB4	618 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RASGRP3	Q8IV61	690 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C16orf78	Q8WTQ4	265 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC5A11	Q8WWX8	675 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RPL3L	Q92901	407 aa	Known RBP	13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CRISPLD2	Q9H0B8	497 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MIEF1	Q9NQG6	463 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DMRT3	Q9NQL9	472 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RAD18	Q9NS91	495 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BTNL2	Q9UIR0	455 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms