RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 AKAP1Q92667 903 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 FAM129BQ96TA1 746 aa12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 CPPED1Q9BRF8 314 aaPredicted RBP12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 POPDC3Q9HBV1 291 aa12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 PCDHB8Q9UN66 801 aa12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 SSR3Q9UNL2 185 aa12.89□□□□□ -0.35
PCDHA11-202ENST00000616325 A0A1B0GVC2 190 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 A6NIN4 97 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 FAM220BPB1ANY3 271 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 MANBAO00462 879 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ADAM12O43184 909 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 GGT2P36268 569 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ACVR1Q04771 509 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TYW3Q6IPR3 259 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SLC51BQ86UW2 128 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SETD6Q8TBK2 473 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 MYLIPQ8WY64 445 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SPATA9Q9BWV2 254 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 V9GYH0 126 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 WASH4PA8MWX3 477 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ISM1B1AKI9 464 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 H3BN98 237 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SAP18O00422 153 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 FABP7O15540 132 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SMAD6O43541 496 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TOXO94900 526 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 EPOP01588 193 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 FCER2P06734 321 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 NAT2P11245 290 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ELNP15502 786 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ENPP1P22413 925 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 RPS5P46782 204 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SOX9P48436 509 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 CSNK2BP67870 215 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TAGLNQ01995 201 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 VMACQ2NL98 169 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 RNASE12Q5GAN4 147 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 RTP2Q5QGT7 225 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TAS1R1Q7RTX1 841 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 PLCZ1Q86YW0 608 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TRPV1Q8NER1 839 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 PIH1D2Q8WWB5 315 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 DHRS7Q9Y394 339 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 PCDHGB3Q9Y5G1 929 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 VCANP13611 3396 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 TRAV6A0A075B6T7 132 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 MTMR11A4FU01 709 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 C2orf78A6NCI8 922 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 J3KTA2 159 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SH3BP5O60239 455 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 GSTM1P09488 218 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ACPPP15309 386 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 M6PRP20645 277 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ITGALP20701 1170 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 PBLDP30039 288 aaPredicted RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 CRATP43155 626 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 MAP2K3P46734 347 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 RPA4Q13156 261 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 LRRC32Q14392 662 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 KIAA0040Q15053 153 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SSX1Q16384 188 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 Q8N402 240 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 C2orf69Q8N8R5 385 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 NDRG2Q9UN36 371 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 ERVW-1Q9UQF0 538 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
PCDHA11-202ENST00000616325 FAM227AF5H4B4 570 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 OR1D2P34982 312 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 KIR3DL1P43629 444 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF157P51786 506 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 PTPN5P54829 565 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 RPL6Q02878 288 aaKnown RBP12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 ADNP2Q6IQ32 1131 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 SERINC5Q86VE9 423 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 MAGEH1Q9H213 219 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF226Q9NYT6 803 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 SLC9A8Q9Y2E8 581 aa12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
PCDHA11-202ENST00000616325 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms