RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 C9orf43Q8TAL5 461 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ART5Q96L15 291 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CITED4Q96RK1 184 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CPEB1Q9BZB8 566 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 AMBRA1Q9C0C7 1298 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 DUSP21Q9H596 190 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRIM39Q9HCM9 518 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 DNAAF2Q9NVR5 837 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CRNNQ9UBG3 495 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TBX21Q9UL17 535 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCL26Q9Y258 94 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 MRPS7Q9Y2R9 242 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PEX16Q9Y5Y5 336 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TPST2O60704 377 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 STSP08842 583 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 IMPA1P29218 277 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TALDO1P37837 337 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ITGA1P56199 1179 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MXD1Q05195 221 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ILF3Q12906 894 aaKnown RBP eCLIP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC13A2Q13183 592 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 AAK1Q2M2I8 961 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCSMST1Q4G0I0 132 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CATSPEREQ5SY80 951 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ANKRD34AQ69YU3 496 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TMPRSS11AQ6ZMR5 421 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MSANTD1Q6ZTZ1 278 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ERN2Q76MJ5 926 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TCEANCQ8N8B7 351 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 NUS1Q96E22 293 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCDC115Q96NT0 180 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 RAD9AQ99638 391 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CITED2Q99967 270 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 XKR8Q9H6D3 395 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 C5AR2Q9P296 337 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TEKT2Q9UIF3 430 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 FBXW2Q9UKT8 454 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 POFUT2Q9Y2G5 429 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 HCFC2Q9Y5Z7 792 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRBV5-4A0A0C4DH59 114 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 LOC110117498-PIK3R3F6TDL0 507 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 UGDHO60701 494 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ARHGEF15O94989 841 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 BCHEP06276 602 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF10P21506 573 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SHMT2P34897 504 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PIGAP37287 484 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 YBX1P67809 324 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 EMX1Q04741 257 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC9A5Q14940 896 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 VITQ6UXI7 678 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 USP30Q70CQ3 517 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ARMCX6Q7L4S7 300 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 GALNT13Q8IUC8 556 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 VRK3Q8IV63 474 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 NFKBIDQ8NI38 313 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF689Q96CS4 500 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 BTNL2Q9UIR0 455 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 GPSM3Q9Y4H4 160 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PKDREJQ9NTG1 2253 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PCNTO95613 3336 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 GABRR3A8MPY1 467 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 H0YIV9 168 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TLX2O43763 284 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 DNTTP04053 509 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 C6P13671 934 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ITIH1P19827 911 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 HBA1P69905 142 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MC1RQ01726 317 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PTSQ03393 145 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 EIF2B5Q13144 721 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 NKG7Q16617 165 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 C1orf94Q6P1W5 598 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 Q6ZPB1 254 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MRPL43Q8N983 215 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR4K5Q8NGD3 323 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SGCDQ92629 289 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC38A2Q96QD8 506 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 NPLQ9BXD5 320 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 OCEL1Q9H607 264 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ATP6V1HQ9UI12 483 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 FBXO10Q9UK96 956 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 RNF6Q9Y252 685 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CKAP5Q14008 2032 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PRRC2CQ9Y520 2896 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SAGE2PA6NJ88 616 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ANKRD28O15084 1053 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ACOX3O15254 700 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALOX5P09917 674 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 AMD1P17707 334 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 BMPR1AP36894 532 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAP2K4P45985 399 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SFSWAPQ12872 951 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ARMC6Q6NXE6 501 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 KIAA1324Q6UXG2 1013 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC39A5Q6ZMH5 540 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PARS2Q7L3T8 475 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms