RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 AKIP1Q9NQ31 210 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HCFC1R1Q9NWW0 138 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 OBP2AQ9NY56 170 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PDP1Q9P0J1 537 aaPredicted RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 STOX2Q9P2F5 926 aaPredicted RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ATP6V1HQ9UI12 483 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 KLHL20Q9Y2M5 609 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 N6AMT1Q9Y5N5 214 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LOC110117498-PIK3R3F6TDL0 507 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CHRNB1P11230 501 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NAT1P18440 290 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ITGB7P26010 798 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SSTR4P31391 388 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CASP3P42574 277 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CDK5R2Q13319 367 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DDX39BQ13838 428 aaKnown RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MED22Q15528 200 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HIST2H2ACQ16777 129 aaPredicted RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 VTCN1Q7Z7D3 282 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RASGEF1AQ8N9B8 481 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 S100ZQ8WXG8 99 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 REPS1Q96D71 796 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 C3orf18Q9UK00 162 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SLC22A14Q9Y267 594 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PABPN1LA6NDY0 278 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SMLR1H3BR10 107 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SPINT1O43278 529 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 BNIP3LO60238 219 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SOD1P00441 154 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GJA1P17302 382 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TNFRSF1BP20333 461 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PXNP49023 591 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HSPA14Q0VDF9 509 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CHIT1Q13231 466 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TSTA3Q13630 321 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF284Q2VY69 593 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ARSIQ5FYB1 569 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ERAP2Q6P179 960 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LYSMD2Q8IV50 215 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 METTL4Q8N3J2 472 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SETD7Q8WTS6 366 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HERVK_113Q902F9 699 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FKBP10Q96AY3 582 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FYTTD1Q96QD9 318 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GFM1Q96RP9 751 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MBOAT4Q96T53 435 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 BCL7BQ9BQE9 202 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SMG9Q9H0W8 520 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DPEP2Q9H4A9 486 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GPN2Q9H9Y4 310 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IL1RAPQ9NPH3 570 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SLC6A13Q9NSD5 602 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 BTBD3Q9Y2F9 522 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NINQ8N4C6 2090 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LRRK1Q38SD2 2015 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 C1orf226A1L170 272 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HIDE1A8MVS5 230 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CPSF4O95639 269 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CATP04040 527 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 KIR3DL1P43629 444 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CRISP3P54108 245 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CXCR4P61073 352 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RAE1P78406 368 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 EIF4HQ15056 248 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CPSF6Q16630 551 aaKnown RBP eCLIP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 UGT8Q16880 541 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ANXA8L1Q5VT79 327 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HORMAD1Q86X24 394 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SYNPOQ8N3V7 929 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CAMKK1Q8N5S9 505 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HOXD1Q9GZZ0 328 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LINC00597Q9H2U6 94 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TRPV4Q9HBA0 871 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ITGB1BP2Q9UKP3 347 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 WBP11Q9Y2W2 641 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IFT52Q9Y366 437 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 A8MVJ9 347 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RGS10O43665 173 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TNFRSF21O75509 655 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FGBP02675 491 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PRNPP04156 253 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TMEM115Q12893 351 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PDE7AQ13946 482 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 AGERQ15109 404 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DHCR24Q15392 516 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TBRG1Q3YBR2 411 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CEP78Q5JTW2 689 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SPANXN2Q5MJ10 180 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CES5AQ6NT32 575 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 AGTRAPQ6RW13 159 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SERPINA13PQ6UXR4 307 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MFSD4AQ8N468 514 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DACT3Q96B18 629 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF707Q96C28 371 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MTERF3Q96E29 417 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF764Q96H86 408 aaPredicted RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 OR4K3Q96R72 315 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RIOK2Q9BVS4 552 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TM9SF3Q9HD45 589 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms