RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 ZNF438Q7Z4V0 828 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 SERINC5Q86VE9 423 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 NXPE1Q8N323 547 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 IPCEF1Q8WWN9 437 aaPredicted RBP13.54□□□□□ -0.24
HOXA3-207ENST00000612286 C8orf48Q96LL4 319 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 MAGIXQ9H6Y5 334 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 DNAJC11Q9NVH1 559 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 MAT2BQ9NZL9 334 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 HSPB11Q9Y547 144 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 PCDHB1Q9Y5F3 818 aa13.54□□□□□ -0.24
HOXA3-207ENST00000612286 ASCC3Q8N3C0 2202 aaKnown RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 TRBV4-1A0A0J9YWV2 114 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 A0A1W2PQL4 384 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 TRBC2A0A5B9 178 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 C12orf71A8MTZ7 269 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 GAPDHSO14556 408 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 SEPT4O43236 478 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 SLITRK5O94991 958 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 PRKCAP17252 672 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 APEX1P27695 318 aaKnown RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 CNTN1Q12860 1018 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 RGNQ15493 299 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 SSX1Q16384 188 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 ZC3H12BQ5HYM0 836 aaKnown RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 CEP78Q5JTW2 689 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 GPRC6AQ5T6X5 926 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 USP30Q70CQ3 517 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 SORCS1Q8WY21 1168 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 OMA1Q96E52 524 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 HRASLS5Q96KN8 279 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 DHRS1Q96LJ7 313 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 LHX3Q9UBR4 397 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 H3BNC9 293 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 SEMA3DO95025 777 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 AOAHP28039 575 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 ITGA1P56199 1179 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 C2orf80Q0P641 193 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 HSPB3Q12988 150 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 TRIM46Q7Z4K8 759 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 C11orf54Q9H0W9 315 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-207ENST00000612286 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
HOXA3-207ENST00000612286 PRAMEF25A6NGN4 478 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 PRRG1O14668 218 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 HYAL3O43820 417 aaPredicted RBP13.52□□□□□ -0.24
HOXA3-207ENST00000612286 F11P03951 625 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 PRPS1L1P21108 318 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 SLC11A1P49279 550 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 CLCN4P51793 760 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 TUBA1BP68363 451 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 ZNF45Q02386 682 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 MAP4K2Q12851 820 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 FAM209AQ5JX71 171 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 TUBA1AQ71U36 451 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 ZNF557Q8N988 423 aaPredicted RBP13.52□□□□□ -0.24
HOXA3-207ENST00000612286 ATP6V1C2Q8NEY4 427 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 DOK4Q8TEW6 326 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 GATAD2BQ8WXI9 593 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 KAT2AQ92830 837 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 SNAPC3Q92966 411 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 OR2A14Q96R47 310 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 DOHHQ9BU89 302 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 TTTY10Q9BZA0 68 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 TRPM5Q9NZQ8 1165 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 DOCK4Q8N1I0 1966 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 MYO16Q9Y6X6 1858 aa13.52□□□□□ -0.24
HOXA3-207ENST00000612286 MYL12BO14950 172 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 AOC2O75106 756 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 BCHEP06276 602 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 SPAM1P38567 509 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 WNT3P56703 355 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 ADGRF1Q5T601 910 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 FUT10Q6P4F1 479 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 Q6ZVL8 140 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 PDLIM5Q96HC4 596 aaKnown RBP13.52□□□□□ -0.25
HOXA3-207ENST00000612286 C7orf34Q96L11 122 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 WACQ9BTA9 647 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 RACGAP1Q9H0H5 632 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 ZDHHC4Q9NPG8 344 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 CLN6Q9NWW5 311 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.25
HOXA3-207ENST00000612286 LOC102723532A0A0G2JNH3 316 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 C5orf58C9J3I9 102 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 KLK1P06870 262 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 PRPS2P11908 318 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 CHMP24386 653 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 CCND3P30281 292 aaPredicted RBP13.52□□□□□ -0.25
HOXA3-207ENST00000612286 SDC2P34741 201 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 TARDBPQ13148 414 aaKnown RBP eCLIP13.52□□□□□ -0.25
HOXA3-207ENST00000612286 LRRC32Q14392 662 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 SLC5A12Q1EHB4 618 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 ATAT1Q5SQI0 421 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 LHFPL3Q86UP9 236 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 NPAS3Q8IXF0 933 aa13.52□□□□□ -0.25
HOXA3-207ENST00000612286 CMTM8Q8IZV2 173 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms