RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CMTM7Q96FZ5 175 aa11.62□□□□□ -0.55
CBWD3-208ENST00000612050 ZNF354BQ96LW1 612 aa11.62□□□□□ -0.55
CBWD3-208ENST00000612050 KCNK13Q9HB14 408 aa11.62□□□□□ -0.55
CBWD3-208ENST00000612050 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
CBWD3-208ENST00000612050 MMACHCQ9Y4U1 282 aa11.62□□□□□ -0.55
CBWD3-208ENST00000612050 KALRNO60229 2985 aa11.62□□□□□ -0.55
CBWD3-208ENST00000612050 BLACEA4D250 179 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 LRIT2A6NDA9 550 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 TRIM49D1C9J1S8 452 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 PYCARD-AS1I3L0S3 204 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 MASP2O00187 686 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 UGDHO60701 494 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 SORBS2O94875 1100 aaKnown RBP11.61□□□□□ -0.55
CBWD3-208ENST00000612050 ECHS1P30084 290 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 CASP2P42575 452 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 ZNF33BQ06732 778 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 SLC13A2Q13183 592 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 GTF2H2Q13888 395 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 ZNF169Q14929 603 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-208ENST00000612050 PCOLCEQ15113 449 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 AP5B1Q2VPB7 878 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 SFT2D3Q587I9 215 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 GRHL2Q6ISB3 625 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 GTF2H2CQ6P1K8 395 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 PAPD4Q6PIY7 484 aaKnown RBP11.61□□□□□ -0.55
CBWD3-208ENST00000612050 Q6ZS92 163 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 SLC5A8Q8N695 610 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 SIRT6Q8N6T7 355 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 GALNT11Q8NCW6 608 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 M1APQ8TC57 530 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 MS4A6EQ96DS6 147 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 TBCDQ9BTW9 1192 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.61□□□□□ -0.55
CBWD3-208ENST00000612050 MRPL46Q9H2W6 279 aaKnown RBP11.61□□□□□ -0.55
CBWD3-208ENST00000612050 LUZP4Q9P127 313 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 COPG1Q9Y678 874 aaKnown RBP11.61□□□□□ -0.55
CBWD3-208ENST00000612050 SPTA1P02549 2419 aa11.61□□□□□ -0.55
CBWD3-208ENST00000612050 TRAV17A0A0B4J275 112 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 A8MUI8 341 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 RIPK2O43353 540 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 SSR2P43308 183 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 TSFMP43897 325 aaKnown RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 CCNG1P51959 295 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 RAB38P57729 211 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 RHAGQ02094 409 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 DDX39BQ13838 428 aaKnown RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PCBP2Q15366 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 IGFBP7Q16270 282 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 MEP1AQ16819 746 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PLEKHN1Q494U1 663 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 TECRLQ5HYJ1 363 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 TTC19Q6DKK2 380 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 FAM180AQ6UWF9 173 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 IGFL2Q6UWQ7 119 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 ZNF595Q8IYB9 648 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 CA13Q8N1Q1 262 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 HORMAD2Q8N7B1 307 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PTGR2Q8N8N7 351 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 ISL2Q96A47 359 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 MIB2Q96AX9 1013 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 MRPL57Q9BQC6 102 aaKnown RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 KLHL31Q9H511 634 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 IPPKQ9H8X2 491 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PPCSQ9HAB8 311 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PRTFDC1Q9NRG1 225 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 STMN3Q9NZ72 180 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PSMC3IPQ9P2W1 217 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 FETUBQ9UGM5 382 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PLAAQ9Y263 795 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PCSK5Q92824 1860 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 A0A0G2JN53 185 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 STX16-NPEPL1H3BU86 382 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 STX16O14662 325 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 DYRK3O43781 588 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 CLDN9O95484 217 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 SMIM10L1P0DMW3 83 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 TLX1P31314 330 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 HNRNPH1P31943 449 aaKnown RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PIK3CBP42338 1070 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 CD97P48960 835 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 HSD17B7P56937 341 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 Q0VFX4 171 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 HYAL2Q12891 473 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 INAQ16352 499 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 C10orf62Q5T681 223 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-208ENST00000612050 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 TMEM151BQ8IW70 566 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 LAS2Q8IYD9 372 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 OR7G3Q8NG95 312 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 DCAKDQ8WVC6 231 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 RGMAQ96B86 450 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 PHF21BQ96EK2 531 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 SMIM10Q96HG1 83 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 RNF32Q9H0A6 362 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 MMP25Q9NPA2 562 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 LANCL2Q9NS86 450 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 MS4A12Q9NXJ0 267 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms