RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ANKRD53Q8N9V6 530 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF420Q8TAQ5 688 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 OR5P2Q8WZ92 322 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 C7orf34Q96L11 122 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 NECTIN4Q96NY8 510 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 EPYCQ99645 322 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 RPP25Q9BUL9 199 aaKnown RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 APOOQ9BUR5 198 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 NLNQ9BYT8 704 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 AMBRA1Q9C0C7 1298 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 SLC6A16Q9GZN6 736 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 MKRN2Q9H000 416 aaKnown RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 OSGEPL1Q9H4B0 414 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 SOX17Q9H6I2 414 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 NEUROD4Q9HD90 331 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 TRPV5Q9NQA5 729 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 C1GALT1Q9NS00 363 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 ABCG2Q9UNQ0 655 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 NCKAP1Q9Y2A7 1128 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 PCDHGB3Q9Y5G1 929 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 CFAP20Q9Y6A4 193 aaKnown RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 TRBC2A0A5B9 178 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 H7BY64 318 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ADAMDEC1O15204 470 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 JRKO75564 520 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 C9P02748 559 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 GBAP04062 536 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 JUNBP17275 347 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ITGA2P17301 1181 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 EFNA1P20827 205 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 DRD1P21728 446 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 NDUFS1P28331 727 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 IGFALSP35858 605 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 MAGEA8P43361 318 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 SOX9P48436 509 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 KIAA1024LP59773 190 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 VLDLRP98155 873 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 MC1RQ01726 317 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 KEAP1Q14145 624 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 KRT33BQ14525 404 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 MLF2Q15773 248 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF691Q5VV52 312 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 BROXQ5VW32 411 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 KIAA1211LQ6NV74 962 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 VTCN1Q7Z7D3 282 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ERI1Q8IV48 349 aaKnown RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 C2orf73Q8N5S3 287 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 LMNTD1Q8N9Z9 388 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 IL17RCQ8NAC3 791 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 DENND6BQ8NEG7 585 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 EZH1Q92800 747 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ERLEC1Q96DZ1 483 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 PRAP1Q96NZ9 151 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 SARGQ9BW04 601 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 NPLQ9BXD5 320 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF717Q9BY31 904 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 DDX31Q9H8H2 851 aaKnown RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 TMEM184CQ9NVA4 438 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 GPATCH2Q9NW75 528 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 CUEDC1Q9NWM3 386 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 TAS2R7Q9NYW3 318 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 TAAR2Q9P1P5 351 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 WDR37Q9Y2I8 494 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 SAMHD1Q9Y3Z3 626 aaKnown RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 COLEC10Q9Y6Z7 277 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 TNRC18O15417 2968 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-206ENST00000609853 LAMA3Q16787 3333 aa11.41□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3DA0A087WVF3 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3IA0A087WXS9 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3EA0A087X179 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3KA0A087X1G2 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3FA6NER0 549 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 MYO1GB0I1T2 1018 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3LB9A6J9 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 RFXAPO00287 272 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 NDUFS4O43181 175 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 OR1F1O43749 312 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 DNAJB5O75953 348 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBX6O95947 436 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 FUCA1P04066 466 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 NUDT7P0C024 238 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CCDC159P0C7I6 412 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3HP0C7X1 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 DRD2P14416 443 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 HOXB2P14652 356 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CRHBPP24387 322 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CTHP32929 405 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 FRKP42685 505 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CSNK1G2P78368 415 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 KCNJ10P78508 379 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 MRPS21P82921 87 aaKnown RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CDK6Q00534 326 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 HTR4Q13639 388 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TUBA3CQ13748 450 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 SCARB2Q14108 478 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms