RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 BTN3A2P78410 334 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 DEPDC1Q5TB30 811 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 QSOX2Q6ZRP7 698 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 RIPOR1Q6ZS17 1223 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 ASB18Q6ZVZ8 466 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 FDCSPQ8NFU4 85 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 RDH11Q8TC12 318 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 EPS8L3Q8TE67 593 aaKnown RBP13.47□□□□□ -0.25
HDDC2-209ENST00000609477 ZNF483Q8TF39 744 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-209ENST00000609477 PEX11GQ96HA9 241 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 QRFPRQ96P65 431 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 AICDAQ9GZX7 198 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 ZNF700Q9H0M5 742 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 COPS7BQ9H9Q2 264 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-209ENST00000609477 LANCL2Q9NS86 450 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 LGALS13Q9UHV8 139 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 MRPS33Q9Y291 106 aaKnown RBP13.47□□□□□ -0.25
HDDC2-209ENST00000609477 TP53TG5Q9Y2B4 290 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 CFAP46Q8IYW2 2715 aa13.47□□□□□ -0.25
HDDC2-209ENST00000609477 PCSK5Q92824 1860 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 ATRXP46100 2492 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 BLACEA4D250 179 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 LRRC14BA6NHZ5 514 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 H3BQF6 201 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 GOLGA8RI6L899 631 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 OR7A17O14581 309 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 FFAR3O14843 346 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 GPR42O15529 346 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 DLX3O60479 287 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 DPM1O60762 260 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 SCELO95171 688 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 PCNAP12004 261 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 COX6A1P12074 109 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 KRT4P19013 534 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 PLA2G16P53816 162 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 PRKAA2P54646 552 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 SLC18A2Q05940 514 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 KLRB1Q12918 225 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 CHAF1BQ13112 559 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 CUL3Q13618 768 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MFSD4BQ5TF39 518 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
HDDC2-209ENST00000609477 JMJD6Q6NYC1 403 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-209ENST00000609477 IGFL3Q6UXB1 125 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MILR1Q7Z6M3 343 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MYLK4Q86YV6 388 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-209ENST00000609477 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 CYP4X1Q8N118 509 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 CA13Q8N1Q1 262 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 OR5T3Q8NGG3 340 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 HUS1BQ8NHY5 278 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 WDR20Q8TBZ3 569 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 PPP4R1Q8TF05 950 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 TM9SF4Q92544 642 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 RGMAQ96B86 450 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 L3HYPDHQ96EM0 354 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 LHPPQ9H008 270 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 ZBTB26Q9HCK0 441 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 LYRM4Q9HD34 91 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 PRDM7Q9NQW5 492 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MKS1Q9NXB0 559 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MID2Q9UJV3 735 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MMACHCQ9Y4U1 282 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 HEMK1Q9Y5R4 338 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-209ENST00000609477 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-209ENST00000609477 MED13Q9UHV7 2174 aa13.46□□□□□ -0.25
HDDC2-209ENST00000609477 TLN1Q9Y490 2541 aaKnown RBP13.45□□□□□ -0.26
HDDC2-209ENST00000609477 TLDC2A0PJX2 215 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF860A6NHJ4 632 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 CLDN4O14493 209 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 COPEO14579 308 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 PRMT3O60678 531 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 JRKO75564 520 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 MLYCDO95822 493 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 PRB1P04280 392 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ITGA3P26006 1051 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 HSD17B7P56937 341 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 RAB38P57729 211 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 RHAGQ02094 409 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 CLCQ05315 142 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 TRAF3Q13114 568 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 NSDHLQ15738 373 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 CPSF6Q16630 551 aaKnown RBP eCLIP13.45□□□□□ -0.26
HDDC2-209ENST00000609477 AP5B1Q2VPB7 878 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF678Q5SXM1 525 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 AGAP7PQ5VUJ5 663 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 CPEB2Q7Z5Q1 589 aaKnown RBP13.45□□□□□ -0.26
HDDC2-209ENST00000609477 CROCCP2Q86T23 111 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 TMEM151BQ8IW70 566 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 KBTBD2Q8IY47 623 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF595Q8IYB9 648 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ARMC2Q8NEN0 867 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 OR52B6Q8NGF0 335 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 AGAP4Q96P64 663 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms