RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GDF5P43026 501 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 MEOX1P50221 254 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 CLCN2P51788 898 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 RUNX2Q13950 521 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 C18orf21Q32NC0 220 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 STEAP4Q687X5 459 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 APCDD1LQ8NCL9 501 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 B3GNT7Q8NFL0 401 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 PHF10Q8WUB8 498 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 SLCO2A1Q92959 643 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 FAR2Q96K12 515 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 DMRTA2Q96SC8 542 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 VKORC1Q9BQB6 163 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 WDR83Q9BRX9 315 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 PNO1Q9NRX1 252 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 ITGB1BP2Q9UKP3 347 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 FBXW2Q9UKT8 454 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 KLF13Q9Y2Y9 288 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 PSAT1Q9Y617 370 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 TEX264Q9Y6I9 313 aa12.5□□□□□ -0.41
POLR2J3-219ENST00000608621 POLQO75417 2590 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 A0A0G2JN53 185 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 KLRC4-KLRK1H3BQV0 150 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 PEX1O43933 1283 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 HS6ST1O60243 411 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 MYO1DO94832 1006 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 C1GALT1C1LP0DN25 315 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 PTGS2P35354 604 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 RFC3P40938 356 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 TAS2R39P59534 338 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 STXBP1P61764 594 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 CDKL1Q00532 357 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 ZNF460Q14592 562 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 MORF4L2Q15014 288 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 TMEM156Q8N614 296 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 POGLUT1Q8NBL1 392 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 CCT6BQ92526 530 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 ANKRD7Q92527 254 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 SDCCAG3Q96C92 435 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 LRRC39Q96DD0 335 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 PRTFDC1Q9NRG1 225 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 MMACHCQ9Y4U1 282 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 OARD1Q9Y530 152 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 TACC2O95359 2948 aa12.49□□□□□ -0.41
POLR2J3-219ENST00000608621 FAM95CA0A1B0GW59 222 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 TFECO14948 347 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 ITGA10O75578 1167 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 WDR47O94967 919 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 GNAZP19086 355 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 SSTR2P30874 369 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 HNMTP50135 292 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 GPR143P51810 404 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 MGAT5Q09328 741 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 TSNQ15631 228 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 TMIGD1Q6UXZ0 262 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 SLCO4C1Q6ZQN7 724 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 CEP97Q8IW35 865 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 SCUBE1Q8IWY4 988 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 EID3Q8N140 333 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 CYP4Z2PQ8N1L4 340 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 TMEM52Q8NDY8 209 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 C16orf52Q8NHV5 167 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 GAL3ST3Q96A11 431 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 MS4A6EQ96DS6 147 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 NPLQ9BXD5 320 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 TRMT1Q9NXH9 659 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 CTNNAL1Q9UBT7 734 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 ZNF223Q9UK11 482 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 CLDN16Q9Y5I7 305 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
POLR2J3-219ENST00000608621 LRIT2A6NDA9 550 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 TGFBR3LH3BV60 316 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 CLDN4O14493 209 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 ERI3O43414 337 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 PRKNO60260 465 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 CDC40O60508 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 TPOP07202 933 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 TFEBP19484 476 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 PPP2R1BP30154 601 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 HNRNPH1P31943 449 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 SLC6A12P48065 614 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 HNRNPFP52597 415 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 ARL4CP56559 192 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 HSD17B7P56937 341 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 RAB38P57729 211 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 GPR85P60893 370 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms