RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HSD17B2P37059 387 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SPAM1P38567 509 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MATKP42679 507 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPL34P49207 117 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAB13P51153 203 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCNQ1P51787 676 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 POLR2JP52435 117 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAP2K6P52564 334 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ARHGDIAP52565 204 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATP12AP54707 1039 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCNK10P57789 538 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SESN2P58004 480 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR4D2P58180 307 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAC3P60763 192 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CD83Q01151 205 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 HSF2Q03933 536 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 IFRD2Q12894 506 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MRPL28Q13084 256 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ADAM15Q13444 863 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 FOXE3Q13461 319 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SEMA3AQ14563 771 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF267Q14586 743 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPS6KA2Q15349 733 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMN1Q16637 294 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MICBQ29980 383 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 QSER1Q2KHR3 1735 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR33Q49SQ1 333 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 IGSF11Q5DX21 431 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PAGE3Q5JUK9 113 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PCID2Q5JVF3 399 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF678Q5SXM1 525 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MPP7Q5T2T1 576 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PDZK1Q5T2W1 519 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 HACD4Q5VWC8 232 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 KIAA1614Q5VZ46 1190 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 KANK2Q63ZY3 851 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SAXO2Q658L1 398 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATG9BQ674R7 924 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RGS7BPQ6MZT1 257 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRNP1Q6NT89 227 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TCTN3Q6NUS6 607 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 XRRA1Q6P2D8 792 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAHD1Q6P587 224 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 LCLAT1Q6UWP7 414 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 C6orf15Q6UXA7 325 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNF165Q6ZSG1 346 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PDZD4Q76G19 769 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF367Q7RTV3 350 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 C16orf62Q7Z3J2 963 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 HSD17B13Q7Z5P4 300 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 COMMD7Q86VX2 200 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP4Z1Q86W10 505 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCNMB4Q86W47 210 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CALHM3Q86XJ0 350 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMC8Q8IU68 726 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 P3H2Q8IVL5 708 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 BBS7Q8IWZ6 715 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 STPG2Q8N412 459 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF557Q8N988 423 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TTC29Q8NA56 475 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 IL17RCQ8NAC3 791 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZBTB44Q8NCP5 570 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLRN3Q8NCR9 226 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR4D10Q8NGI6 311 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR9I1Q8NGQ6 314 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CNIH3Q8TBE1 160 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 AGR3Q8TD06 166 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF675Q8TD23 568 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR151Q8TDV0 419 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF431Q8TF32 576 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 HEXDCQ8WVB3 486 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC13A3Q8WWT9 602 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC9A6Q92581 669 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 FBXW5Q969U6 566 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MYLPFQ96A32 169 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 FUBP1Q96AE4 644 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CREB3L1Q96BA8 519 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF669Q96BR6 464 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PYCR2Q96C36 320 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNF31Q96EP0 1072 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDCA5Q96FF9 252 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 P2RY11Q96G91 374 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MSANTD3Q96H12 275 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ARL5BQ96KC2 179 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 C3orf30Q96M34 536 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF599Q96NL3 588 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 WWC2-AS2Q96NR7 200 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PPP1R2P1Q96PQ5 205 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 AGAP2Q99490 1192 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SEPHS2Q99611 448 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 NPAS1Q99742 590 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 APOL2Q9BQE5 337 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 COPS4Q9BT78 406 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TBCDQ9BTW9 1192 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MED18Q9BUE0 208 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TAPBPLQ9BX59 468 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 C11orf54Q9H0W9 315 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 DNTTIP1Q9H147 329 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ABCG4Q9H172 646 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms