RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 DHPSP49366 369 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GSK3BP49841 420 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GPLD1P80108 840 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RHDQ02161 417 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CSTF1Q05048 431 aaKnown RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LIPEQ05469 1076 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CYP4F3Q08477 520 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C2orf80Q0P641 193 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ABHD18Q0P651 414 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CAPRIN1Q14444 709 aaKnown RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC9A5Q14940 896 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CCDC6Q16204 474 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZC3H12BQ5HYM0 836 aaKnown RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TOR1AIP1Q5JTV8 583 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FBXO42Q6P3S6 717 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ERICH5Q6P6B1 374 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ABHD13Q7L211 337 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SERPINA11Q86U17 422 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DHFR2Q86XF0 187 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MSRB3Q8IXL7 192 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DNAJB14Q8TBM8 379 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RERGQ96A58 199 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TM4SF18Q96CE8 201 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SMIM10Q96HG1 83 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PANX1Q96RD7 426 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC38A3Q99624 504 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KCTD14Q9BQ13 255 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NLNQ9BYT8 704 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RAD21L1Q9H4I0 556 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KAT8Q9H7Z6 458 aaKnown RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CLK4Q9HAZ1 481 aaKnown RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 IL1RL2Q9HB29 575 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 S100A14Q9HCY8 104 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NEUROD4Q9HD90 331 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MIEF1Q9NQG6 463 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ACSS1Q9NUB1 689 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZSCAN32Q9NX65 697 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC25A37Q9NYZ2 338 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PCDHB14Q9Y5E9 798 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SNX13Q9Y5W8 968 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ADAMTS9Q9P2N4 1935 aa11.7□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 A0A1B0GTQ1 180 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C1orf226A1L170 272 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TLCD2A6NGC4 264 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EVPLLA8MZ36 301 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ERI3O43414 337 aaKnown RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 AKAP10O43572 662 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SRPX2O60687 465 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EPN2O95208 641 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LRATO95237 230 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ANP32DO95626 131 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GPIP06744 558 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 IL3P08700 152 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ALPPL2P10696 532 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LAMP1P11279 417 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GLB1P16278 677 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GPX2P18283 190 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ATP5A1P25705 553 aaKnown RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EPHA8P29322 1005 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NUBP1P53384 320 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EMP3P54852 163 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MAZP56270 477 aaKnown RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SKP1P63208 163 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MS4A2Q01362 244 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC34A1Q06495 639 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BIRC2Q13490 618 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RCN1Q15293 331 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZCCHC8Q6NZY4 707 aaKnown RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TSSK4Q6SA08 328 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KANSL1Q7Z3B3 1105 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CALHM3Q86XJ0 350 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SAMD14Q8IZD0 417 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C19orf47Q8N9M1 422 aaKnown RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FAM47BQ8NA70 645 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZBTB44Q8NCP5 570 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BHLHE22Q8NFJ8 381 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PSMA8Q8TAA3 256 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 JPH3Q8WXH2 748 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TCTN2Q96GX1 697 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC45A3Q96JT2 553 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LRGUKQ96M69 825 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PPM1MQ96MI6 270 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TEFMQ96QE5 360 aaKnown RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SERINC2Q96SA4 455 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ECSITQ9BQ95 431 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C17orf62Q9BQA9 187 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EFHD1Q9BUP0 239 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 AICDAQ9GZX7 198 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 COPS7BQ9H9Q2 264 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MS4A12Q9NXJ0 267 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLAMF8Q9P0V8 285 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SEMA5BQ9P283 1151 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PHF11Q9UIL8 331 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 VPS4AQ9UN37 437 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PCDHGB4Q9UN71 923 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms