RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 KRT16P08779 473 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 COX7A2P14406 83 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 SLC9A5Q14940 896 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 DNAL1Q4LDG9 190 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 TCTE1Q5JU00 501 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 WASHC2DQ5SRD0 308 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 OR8K5Q8NH50 307 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.47■■□□□ 1.037e-6■■■■□ 22
IRF3-228ENST00000601291 VPS33AQ96AX1 596 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 SLC41A2Q96JW4 573 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 ZNF768Q9H5H4 540 aaKnown RBP21.47■■□□□ 1.03
IRF3-228ENST00000601291 SLC52A3Q9NQ40 469 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 TAS2R1Q9NYW7 299 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 COL5A1P20908 1838 aaPredicted RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 A8MU76 341 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 FBP2O00757 339 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 HCRTR1O43613 425 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 GUCY1B2O75343 617 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 PGRP06401 933 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 ANKRD34CP0C6C1 535 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 ACP1P24666 158 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 ATP5A1P25705 553 aaKnown RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 S100A3P33764 101 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 GABRA4P48169 554 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 MTTPP55157 894 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 BTN3A2P78410 334 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 SRSF11Q05519 484 aaKnown RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 AASDHQ4L235 1098 aaPredicted RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 SPANXN4Q5MJ08 99 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 TMEM214Q6NUQ4 689 aaKnown RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 C16orf89Q6UX73 402 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 ZNF793Q6ZN11 406 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 RIPOR1Q6ZS17 1223 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 ASRGL1Q7L266 308 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 R3HCC1LQ7Z5L2 792 aaKnown RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 NAXDQ8IW45 347 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 D2HGDHQ8N465 521 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 ACOT4Q8N9L9 421 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 KLHL6Q8WZ60 621 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 GFM1Q96RP9 751 aaKnown RBP21.46■■□□□ 1.03
IRF3-228ENST00000601291 FAM86C1Q9NVL1 165 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 IRAK4Q9NWZ3 460 aa21.46■■□□□ 1.03
IRF3-228ENST00000601291 SCELO95171 688 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 IL3P08700 152 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 CD59P13987 128 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 ALOX12P18054 663 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 NELFEP18615 380 aaKnown RBP21.45■■□□□ 1.02
IRF3-228ENST00000601291 DGKQP52824 942 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 C2orf80Q0P641 193 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 HEPACAMQ14CZ8 416 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 PGS1Q32NB8 556 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 FAM71E1Q6IPT2 247 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 MTERF3Q96E29 417 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 ZNF285Q96NJ3 590 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 REEP4Q9H6H4 257 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 LYARQ9NX58 379 aaKnown RBP21.45■■□□□ 1.02
IRF3-228ENST00000601291 SLC22A7Q9Y694 548 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 MDC1Q14676 2089 aaKnown RBP21.45■■□□□ 1.02
IRF3-228ENST00000601291 LAMA1P25391 3075 aa21.45■■□□□ 1.02
IRF3-228ENST00000601291 CASC3O15234 703 aaKnown RBP21.44■■□□□ 1.02
IRF3-228ENST00000601291 TMPRSS11DO60235 418 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 KLHL18O94889 574 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 FAM58BPP0C7Q3 252 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 SMIM10L1P0DMW3 83 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 DDX5P17844 614 aaKnown RBP21.44■■□□□ 1.02
IRF3-228ENST00000601291 CERS1P27544 350 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 KIR3DL1P43629 444 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 KLC1Q07866 573 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 DMTNQ08495 405 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 NDUFA9Q16795 377 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 UGT8Q16880 541 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 DGLUCYQ7Z3D6 616 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 GPR180Q86V85 440 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 FBXO27Q8NI29 283 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 ROPN1LQ96C74 230 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 TM4SF18Q96CE8 201 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 SMIM10Q96HG1 83 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 OR52E6Q96RD3 313 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 SERINC2Q96SA4 455 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 FAIM2Q9BWQ8 316 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 MIEF1Q9NQG6 463 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 RXFP3Q9NSD7 469 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 ATAD3AQ9NVI7 634 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 PDP2Q9P2J9 529 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 ANKRD65E5RJM6 399 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 FOXD2O60548 495 aaPredicted RBP21.44■■□□□ 1.02
IRF3-228ENST00000601291 DNAJC8O75937 253 aaPredicted RBP21.44■■□□□ 1.02
IRF3-228ENST00000601291 CPOXP36551 454 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 SKP1P63208 163 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 SLC25A3Q00325 362 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 ACTN3Q08043 901 aaPredicted RBP21.44■■□□□ 1.02
IRF3-228ENST00000601291 SLAMF1Q13291 335 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 PRTGQ2VWP7 1150 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 DEFB134Q4QY38 66 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 CPTPQ5TA50 214 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 HACD2Q6Y1H2 254 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 ZNF574Q6ZN55 896 aaPredicted RBP21.44■■□□□ 1.02
IRF3-228ENST00000601291 MSANTD1Q6ZTZ1 278 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 TMPRSS9Q7Z410 1059 aa21.44■■□□□ 1.02
IRF3-228ENST00000601291 CAMKMTQ7Z624 323 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms