RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 PLAC1Q9HBJ0 212 aa14.87□□□□□ -0.03
LINC02560-201ENST00000596379 ASIC3Q9UHC3 531 aa14.87□□□□□ -0.03
LINC02560-201ENST00000596379 KLF13Q9Y2Y9 288 aaPredicted RBP14.87□□□□□ -0.03
LINC02560-201ENST00000596379 HRH3Q9Y5N1 445 aa14.87□□□□□ -0.03
LINC02560-201ENST00000596379 TRBV11-1A0A0K0K1C0 115 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 CDC7O00311 574 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 HS6ST1O60243 411 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 CDC40O60508 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
LINC02560-201ENST00000596379 MYO1DO94832 1006 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 TPOP07202 933 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 SERPINA6P08185 405 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 RIPPLY3P57055 190 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 BTN3A2P78410 334 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 TLE4Q04727 773 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 PPP1R3AQ16821 1122 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 TRMT10BQ6PF06 316 aaKnown RBP14.86□□□□□ -0.03
LINC02560-201ENST00000596379 MEX3BQ6ZN04 569 aaKnown RBP14.86□□□□□ -0.03
LINC02560-201ENST00000596379 TMEM156Q8N614 296 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 ACBD4Q8NC06 268 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 B3GNT7Q8NFL0 401 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 FAM57AQ8TBR7 257 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 CHTF18Q8WVB6 975 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 CFAP36Q96G28 342 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 PDLIM2Q96JY6 352 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 OSBPL9Q96SU4 736 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 PNO1Q9NRX1 252 aaKnown RBP14.86□□□□□ -0.03
LINC02560-201ENST00000596379 COQ3Q9NZJ6 369 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 FBXW2Q9UKT8 454 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 CORO1CQ9ULV4 474 aaPredicted RBP14.86□□□□□ -0.03
LINC02560-201ENST00000596379 KCNE2Q9Y6J6 123 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 C2CD3Q4AC94 2353 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 MED13LQ71F56 2210 aa14.86□□□□□ -0.03
LINC02560-201ENST00000596379 ANKRD17O75179 2603 aaKnown RBP14.86□□□□□ -0.03
LINC02560-201ENST00000596379 TACC2O95359 2948 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 ITGA10O75578 1167 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 TFEBP19484 476 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 CAPN3P20807 821 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 SAT1P21673 171 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 ELK3P41970 407 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 RUNX2Q13950 521 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 CEP128Q6ZU80 1094 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 MDGA2Q7Z553 956 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 CD163Q86VB7 1156 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 CYP4Z2PQ8N1L4 340 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 C16orf52Q8NHV5 167 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 FAR2Q96K12 515 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
LINC02560-201ENST00000596379 ZNF223Q9UK11 482 aaPredicted RBP14.85□□□□□ -0.03
LINC02560-201ENST00000596379 MMACHCQ9Y4U1 282 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 ZNF407Q9C0G0 2248 aa14.85□□□□□ -0.03
LINC02560-201ENST00000596379 HCFC1P51610 2035 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 A0A0G2JN53 185 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 NPEPPSL1A6NEC2 478 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 H2AFYO75367 372 aaKnown RBP14.84□□□□□ -0.03
LINC02560-201ENST00000596379 PDE9AO76083 593 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 ZNF37AP17032 561 aaPredicted RBP14.84□□□□□ -0.03
LINC02560-201ENST00000596379 IVDP26440 423 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 GPR143P51810 404 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 GPR85P60893 370 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 C18orf21Q32NC0 220 aaPredicted RBP14.84□□□□□ -0.03
LINC02560-201ENST00000596379 CMPK2Q5EBM0 449 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 PDIK1LQ8N165 341 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 SLC35F6Q8N357 371 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 MARVELD2Q8N4S9 558 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 ZFP62Q8NB50 900 aaPredicted RBP14.84□□□□□ -0.03
LINC02560-201ENST00000596379 OR52N2Q8NGI0 321 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 NCLNQ969V3 563 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 VMP1Q96GC9 406 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 EGFL8Q99944 293 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 MCCC2Q9HCC0 563 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 PRTFDC1Q9NRG1 225 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 PPIEQ9UNP9 301 aaKnown RBP14.84□□□□□ -0.03
LINC02560-201ENST00000596379 CHMP2BQ9UQN3 213 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 ADGRG4Q8IZF6 3080 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 INTS1Q8N201 2190 aaKnown RBP14.84□□□□□ -0.03
LINC02560-201ENST00000596379 DNAJC13O75165 2243 aa14.84□□□□□ -0.03
LINC02560-201ENST00000596379 HIVEP1P15822 2718 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 TGFBR3LH3BV60 316 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 PRKNO60260 465 aaPredicted RBP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 C1GALT1C1LP0DN25 315 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 PPP2R1BP30154 601 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 GDF5P43026 501 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 NR0B1P51843 470 aaKnown RBP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 STXBP1P61764 594 aaKnown RBP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 ZNF460Q14592 562 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 TERF2Q15554 542 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 TMEM211Q6ICI0 200 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 SCUBE1Q8IWY4 988 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 NKAPQ8N5F7 415 aaKnown RBP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 TMEM52Q8NDY8 209 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 CCT6BQ92526 530 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 ANKRD7Q92527 254 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 GAL3ST3Q96A11 431 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 TREX2Q9BQ50 279 aaPredicted RBP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 CCDC77Q9BR77 488 aa14.83□□□□□ -0.04
LINC02560-201ENST00000596379 WDR83Q9BRX9 315 aaKnown RBP14.83□□□□□ -0.04
LINC02560-201ENST00000596379 NPLQ9BXD5 320 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms