RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ZNF483Q8TF39 744 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 F2RL3Q96RI0 385 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ERVK-6Q9BXR3 956 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 MS4A8Q9BY19 250 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 VN1R1Q9GZP7 353 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 SEMA4BQ9NPR2 832 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF71Q9NQZ8 489 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 PSD3Q9NYI0 1048 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 TP53TG5Q9Y2B4 290 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 STK38LQ9Y2H1 464 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 RNF11Q9Y3C5 154 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 FER1L5A0AVI2 2057 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 LOC102723996A0A087X1L8 192 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 A0A1W2PQ72 361 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 B8ZZF3 427 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 OR7A17O14581 309 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 DLX3O60479 287 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 JRKO75564 520 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 SUPT7LO94864 414 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 B3GALT4O96024 378 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 TGFB1P01137 390 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 MYL2P10916 166 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 ITGA3P26006 1051 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 ARFIP1P53367 373 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 PRKAA2P54646 552 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 OLR1P78380 273 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 DDX39BQ13838 428 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 MYBPC3Q14896 1274 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 ZRSR2Q15696 482 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 DEPDC1Q5TB30 811 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 KHDRBS2Q5VWX1 349 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 TTC19Q6DKK2 380 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 FAAH2Q6GMR7 532 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 CA13Q8N1Q1 262 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 ARMC2Q8NEN0 867 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 FDCSPQ8NFU4 85 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 RDH11Q8TC12 318 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 RGMAQ96B86 450 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 QRFPRQ96P65 431 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 AICDAQ9GZX7 198 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 IQCGQ9H095 443 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF700Q9H0M5 742 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 MLXIPLQ9NP71 852 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 RIC8BQ9NVN3 520 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 C5AR2Q9P296 337 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 MRPS33Q9Y291 106 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 SPACA6W5XKT8 324 aa16.3■□□□□ 0.2
SHKBP1-212ENST00000596163 IGHV1-45A0A0A0MS14 117 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 MAGEB17A8MXT2 336 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 FOXE1O00358 373 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 CLDN4O14493 209 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 PRMT3O60678 531 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 ERLIN1O75477 346 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 MLYCDO95822 493 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 TBX6O95947 436 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 TSFMP43897 325 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 CLCQ05315 142 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 EEF1A2Q05639 463 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 SLC18A2Q05940 514 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 ACTN3Q08043 901 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 IFT88Q13099 833 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 NSDHLQ15738 373 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 GGTA1PQ4G0N0 100 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF678Q5SXM1 525 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 VWA5B1Q5TIE3 1220 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 ADNP2Q6IQ32 1131 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 CPEB2Q7Z5Q1 589 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 PARP9Q8IXQ6 854 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 KBTBD2Q8IY47 623 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 CCDC63Q8NA47 563 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 OR52B6Q8NGF0 335 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 C8orf44Q96CB5 159 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 TUBB6Q9BUF5 446 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 LHPPQ9H008 270 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF160Q9HCG1 818 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 ZBTB26Q9HCK0 441 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 LANCL2Q9NS86 450 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 LGALS13Q9UHV8 139 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 PLAAQ9Y263 795 aa16.29■□□□□ 0.2
SHKBP1-212ENST00000596163 LOC400499M0QZD8 3231 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 A0A0G2JN53 185 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 SYNDIG1LA6NDD5 238 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 C4orf51C9J302 202 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 B4GALT2O60909 372 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 COX6A1P12074 109 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 CDH13P55290 713 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 RAB38P57729 211 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 RHAGQ02094 409 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 KLRB1Q12918 225 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 TRAF3Q13114 568 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 CUL3Q13618 768 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 RUNX2Q13950 521 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 UNC50Q53HI1 259 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 FRG2Q64ET8 278 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 OR4C11Q6IEV9 310 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms