RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PHEXP78562 749 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 TSNAXIP1Q2TAA8 658 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 B3GNTL1Q67FW5 361 aaPredicted RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 PLAG1Q6DJT9 500 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 PAPD4Q6PIY7 484 aaKnown RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 CHSY3Q70JA7 882 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 TRMT10CQ7L0Y3 403 aaKnown RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 CENPLQ8N0S6 344 aaPredicted RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 CNPY4Q8N129 248 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 TEX9Q8N6V9 391 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 Q8NA96 180 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 OR2L5Q8NG80 312 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 UHMK1Q8TAS1 419 aaKnown RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 M1APQ8TC57 530 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 MS4A6EQ96DS6 147 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 SMIM10Q96HG1 83 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 IMMP1LQ96LU5 166 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 ZNF354BQ96LW1 612 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 CENPKQ9BS16 269 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.34■□□□□ 0.213e-7■■■□□ 17.6
IRF3-208ENST00000594387 PRDM9Q9NQV7 894 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 STMN3Q9NZ72 180 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 ZNF180Q9UJW8 692 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 SPACA6W5XKT8 324 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 OR2W5A6NFC9 320 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 SMIM24O75264 130 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 ALDOAP04075 364 aaKnown RBP16.33■□□□□ 0.2
IRF3-208ENST00000594387 ITGAMP11215 1152 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 CASP2P42575 452 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 MTTPP55157 894 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 RHAGQ02094 409 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 ZNF33BQ06732 778 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 SETDB1Q15047 1291 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 QSOX2Q6ZRP7 698 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 CA13Q8N1Q1 262 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 OR1N1Q8NGS0 311 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 HAS2Q92819 552 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 ATP6V1E2Q96A05 226 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 REPS1Q96D71 796 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 SNRNP40Q96DI7 357 aaKnown RBP16.33■□□□□ 0.2
IRF3-208ENST00000594387 SERINC2Q96SA4 455 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 CCDC77Q9BR77 488 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 LANCL2Q9NS86 450 aa16.33■□□□□ 0.2
IRF3-208ENST00000594387 ZNF490Q9ULM2 529 aaPredicted RBP16.33■□□□□ 0.2
IRF3-208ENST00000594387 TRAV17A0A0B4J275 112 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 A0A0G2JN53 185 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 HMX2A2RU54 273 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 SYNDIG1LA6NDD5 238 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 SNRPAP09012 282 aaKnown RBP16.32■□□□□ 0.2
IRF3-208ENST00000594387 ECHS1P30084 290 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 TSFMP43897 325 aaKnown RBP16.32■□□□□ 0.2
IRF3-208ENST00000594387 AP5B1Q2VPB7 878 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 LIPJQ5W064 366 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 METTL2BQ6P1Q9 378 aaKnown RBP16.32■□□□□ 0.2
IRF3-208ENST00000594387 CUZD1Q86UP6 607 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 BOD1L1Q8NFC6 3051 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 PSMF1Q92530 271 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 ACTR8Q9H981 624 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 ASF1BQ9NVP2 202 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 MMACHCQ9Y4U1 282 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
IRF3-208ENST00000594387 TRIM49D1C9J1S8 452 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 CELA2AP08217 269 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 ABHD2P08910 425 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 GNLYP22749 145 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 HNRNPH1P31943 449 aaKnown RBP16.31■□□□□ 0.2
IRF3-208ENST00000594387 SOX11P35716 441 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 RAB38P57729 211 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 SLC13A2Q13183 592 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 GTF2H2Q13888 395 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 UBAP2LQ14157 1087 aaKnown RBP16.31■□□□□ 0.2
IRF3-208ENST00000594387 NAA30Q147X3 362 aaPredicted RBP16.31■□□□□ 0.2
IRF3-208ENST00000594387 MEP1AQ16819 746 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 TMEM35AQ53FP2 167 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 FHL5Q5TD97 284 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 GRHL2Q6ISB3 625 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 GTF2H2CQ6P1K8 395 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 FAM180AQ6UWF9 173 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 SLC5A8Q8N695 610 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 TSLPQ969D9 159 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 MTBPQ96DY7 904 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 CMTM7Q96FZ5 175 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 TBCDQ9BTW9 1192 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 MMP25Q9NPA2 562 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 PRTFDC1Q9NRG1 225 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 PLA2G3Q9NZ20 509 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 PCDHGA10Q9Y5H3 936 aa16.31■□□□□ 0.2
IRF3-208ENST00000594387 IQANK1A0A1B0GTG1 560 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 DNAJB6O75190 326 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 MTHFD2P13995 350 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 RAP1GDS1P52306 607 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 EFNA3P52797 238 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 HSD17B7P56937 341 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 BTG2P78543 158 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 PCDH1Q08174 1060 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 DDX39BQ13838 428 aaKnown RBP16.3■□□□□ 0.2
IRF3-208ENST00000594387 PCBP2Q15366 365 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■■■ 29.6
IRF3-208ENST00000594387 ADPRMQ3LIE5 342 aa16.3■□□□□ 0.2
IRF3-208ENST00000594387 PRR30Q53SZ7 412 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms