RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FAM117AQ9C073 453 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 C20orf27Q9GZN8 174 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 TMEM216Q9P0N5 145 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 IL17BQ9UHF5 180 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 PCDHGA6Q9Y5G7 932 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 CFAP47Q6ZTR5 3102 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 K7ENP7 123 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 P2RX6O15547 441 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 BAG2O95816 211 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 UQCRBP14927 111 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 EPB42P16452 691 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 PRDX6P30041 224 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 RPS15P62841 145 aaKnown RBP18.65■□□□□ 0.58
LSM4-203ENST00000593829 PCBP2Q15366 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
LSM4-203ENST00000593829 COL28A1Q2UY09 1125 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 NKAIN1Q4KMZ8 207 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 METTL2BQ6P1Q9 378 aaKnown RBP18.65■□□□□ 0.58
LSM4-203ENST00000593829 INO80CQ6PI98 192 aaPredicted RBP18.65■□□□□ 0.58
LSM4-203ENST00000593829 ASPGQ86U10 573 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 TMEM151AQ8N4L1 468 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 CAMKVQ8NCB2 501 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 SLC13A3Q8WWT9 602 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 TM4SF19Q96DZ7 209 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 BTBD9Q96Q07 612 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 C17orf62Q9BQA9 187 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 EHD1Q9H4M9 534 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 ANGPTL3Q9Y5C1 460 aa18.65■□□□□ 0.58
LSM4-203ENST00000593829 SMIM31A0A1B0GVY4 71 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 C9J4A7 227 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 KATNA1O75449 491 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 RAB40ALP0C0E4 278 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 WT1P19544 449 aaPredicted RBP18.64■□□□□ 0.58
LSM4-203ENST00000593829 AHRP35869 848 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 LSAMPQ13449 338 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 XKR6Q5GH73 641 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 PTGR2Q8N8N7 351 aaPredicted RBP18.64■□□□□ 0.58
LSM4-203ENST00000593829 PHF21BQ96EK2 531 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 C10orf90Q96M02 699 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 KLHL4Q9C0H6 718 aa18.64■□□□□ 0.58
LSM4-203ENST00000593829 DSPP15924 2871 aaKnown RBP18.64■□□□□ 0.58
LSM4-203ENST00000593829 STX16-NPEPL1H3BU86 382 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 STX16O14662 325 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 GLRA3O75311 464 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 MED26O95402 600 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 STATHP02808 62 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 SBK3P0C264 359 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 ZCCHC18P0CG32 403 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 EPORP19235 508 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 MED21Q13503 144 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 UBAP2LQ14157 1087 aaKnown RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 SLBPQ14493 270 aaKnown RBP eCLIP18.64■□□□□ 0.57
LSM4-203ENST00000593829 NDUFA9Q16795 377 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 FAM198BQ6UWH4 519 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 KRT78Q8N1N4 520 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 DRAXINQ8NBI3 349 aaPredicted RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 WDR34Q96EX3 536 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 CRELD1Q96HD1 420 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 EBF4Q9BQW3 602 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 PITHD1Q9GZP4 211 aaPredicted RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 ZNF395Q9H8N7 513 aaPredicted RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 IFT80Q9P2H3 777 aaPredicted RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 FARSAQ9Y285 508 aaKnown RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 PKD1L2Q7Z442 2459 aa18.64■□□□□ 0.57
LSM4-203ENST00000593829 MDC1Q14676 2089 aaKnown RBP18.64■□□□□ 0.57
LSM4-203ENST00000593829 CAPN1P07384 714 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 SLC35G6P0C7Q6 338 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 GRK2P25098 689 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 IRF8Q02556 426 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 CCNIQ14094 377 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 DOC2AQ14183 400 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 ARHGAP40Q5TG30 622 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 PRMT9Q6P2P2 845 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 C16orf46Q6P387 395 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 TMIGD1Q6UXZ0 262 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 ARHGEF39Q8N4T4 335 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 SNRNP27Q8WVK2 155 aaKnown RBP18.63■□□□□ 0.57
LSM4-203ENST00000593829 STARD8Q92502 1023 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 MACROD1Q9BQ69 325 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 EFCAB11Q9BUY7 163 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 PRORYQ9H606 182 aa18.63■□□□□ 0.57
LSM4-203ENST00000593829 GPN3Q9UHW5 284 aaPredicted RBP18.63■□□□□ 0.57
LSM4-203ENST00000593829 MRPS18BQ9Y676 258 aaKnown RBP18.63■□□□□ 0.57
LSM4-203ENST00000593829 LRRC14BA6NHZ5 514 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 ZNF891A8MT65 544 aaPredicted RBP18.62■□□□□ 0.57
LSM4-203ENST00000593829 PRAMEF4O60810 478 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 SIX3O95343 332 aaPredicted RBP18.62■□□□□ 0.57
LSM4-203ENST00000593829 SERPINE1P05121 402 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 ITGAXP20702 1163 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 EEF1DP29692 281 aaKnown RBP18.62■□□□□ 0.57
LSM4-203ENST00000593829 PIK3CGP48736 1102 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 MC1RQ01726 317 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 CHIT1Q13231 466 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 PWP1Q13610 501 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 NCF4Q15080 339 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 PRAMEF9Q5VWM5 478 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 MLIPQ5VWP3 458 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 ANKRD53Q8N9V6 530 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 CMTM5Q96DZ9 223 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 MVB12AQ96EY5 273 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms