RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CTNNAL1Q9UBT7 734 aa19.14■□□□□ 0.65
TRIM47-207ENST00000593089 GTF3C1Q12789 2109 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 APCP25054 2843 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 TRBV11-1A0A0K0K1C0 115 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 CDK2AP1O14519 115 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 H2AFYO75367 372 aaKnown RBP19.13■□□□□ 0.65
TRIM47-207ENST00000593089 AGAP20933 346 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 TRHRP34981 398 aaPredicted RBP19.13■□□□□ 0.65
TRIM47-207ENST00000593089 HNMTP50135 292 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 FRG1Q14331 258 aaKnown RBP19.13■□□□□ 0.65
TRIM47-207ENST00000593089 FASTKD3Q14CZ7 662 aaKnown RBP19.13■□□□□ 0.65
TRIM47-207ENST00000593089 CEP97Q8IW35 865 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 AGAP11Q8TF27 550 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 PDLIM2Q96JY6 352 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 FAR2Q96K12 515 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 RUNDC3BQ96NL0 473 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 PHF12Q96QT6 1004 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 TRIM45Q9H8W5 580 aaPredicted RBP19.13■□□□□ 0.65
TRIM47-207ENST00000593089 GPAMQ9HCL2 828 aa19.13■□□□□ 0.65
TRIM47-207ENST00000593089 PNO1Q9NRX1 252 aaKnown RBP19.13■□□□□ 0.65
TRIM47-207ENST00000593089 NCF1BA6NI72 391 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 NCF1CA8MVU1 366 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 C19orf84I3L1E1 186 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 MYO1DO94832 1006 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 SEC31AO94979 1220 aaKnown RBP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 CLDN14O95500 239 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 C1GALT1C1LP0DN25 315 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 NCF1P14598 390 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 GNAZP19086 355 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 MEOX1P50221 254 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 STXBP1P61764 594 aaKnown RBP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 RUNX2Q13950 521 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 SLBPQ14493 270 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 C3P1Q6ZMU1 363 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 SLCO4C1Q6ZQN7 724 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 ADAMTSL2Q86TH1 951 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 APCDD1LQ8NCL9 501 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 B3GNT7Q8NFL0 401 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 GAL3ST3Q96A11 431 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 MTFMTQ96DP5 389 aaKnown RBP19.12■□□□□ 0.65
TRIM47-207ENST00000593089 MOCS1Q9NZB8 636 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 FBXW2Q9UKT8 454 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 MMACHCQ9Y4U1 282 aa19.12■□□□□ 0.65
TRIM47-207ENST00000593089 PKDREJQ9NTG1 2253 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 ERI3O43414 337 aaKnown RBP19.11■□□□□ 0.65
TRIM47-207ENST00000593089 HNRNPH1P31943 449 aaKnown RBP19.11■□□□□ 0.65
TRIM47-207ENST00000593089 PTGER1P34995 402 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 RFC3P40938 356 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 SLC6A12P48065 614 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 CLCN2P51788 898 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 TMIGD1Q6UXZ0 262 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 CAPN12Q6ZSI9 719 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 DOLPP1Q86YN1 238 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 CHERPQ8IWX8 916 aaKnown RBP19.11■□□□□ 0.65
TRIM47-207ENST00000593089 RHBDF1Q96CC6 855 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 MS4A6EQ96DS6 147 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 VPS39Q96JC1 886 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 KCNF1Q9H3M0 494 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 PRTFDC1Q9NRG1 225 aa19.11■□□□□ 0.65
TRIM47-207ENST00000593089 KLF13Q9Y2Y9 288 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-207ENST00000593089 PRRG2O14669 202 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 TFECO14948 347 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-207ENST00000593089 TP73O15350 636 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 PIAS1O75925 651 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 PPP2R1BP30154 601 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 SLC12A2P55011 1212 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 SLC13A2Q13183 592 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 FGD2Q7Z6J4 655 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 CREG2Q8IUH2 290 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 SULF2Q8IWU5 870 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 SCUBE1Q8IWY4 988 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 KLHDC8AQ8IYD2 350 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 ARMC10Q8N2F6 343 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 TMEM156Q8N614 296 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 FAM47BQ8NA70 645 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 TMEM52Q8NDY8 209 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 TTLQ8NG68 377 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 LURAP1Q96LR2 239 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 TRIM8Q9BZR9 551 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 RHOJQ9H4E5 214 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 ZNF223Q9UK11 482 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-207ENST00000593089 ASB1Q9Y576 335 aa19.1■□□□□ 0.65
TRIM47-207ENST00000593089 CACNA1CQ13936 2221 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 FBN2P35556 2912 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 LRIT2A6NDA9 550 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 USP27XA6NNY8 438 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 EFCAB8A8MWE9 144 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 KLRC4-KLRK1H3BQV0 150 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 TGFBR3LH3BV60 316 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 PEX1O43933 1283 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 ITGA10O75578 1167 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 HNRNPFP52597 415 aaKnown RBP19.09■□□□□ 0.65
TRIM47-207ENST00000593089 RAB38P57729 211 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 TGFBIQ15582 683 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 FBXO48Q5FWF7 155 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 ZBED8Q8IZ13 594 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 CYP4Z2PQ8N1L4 340 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 KRT78Q8N1N4 520 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 SPATA6LQ8N4H0 392 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 POGLUT1Q8NBL1 392 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms