RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 HECTD3Q5T447 861 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 LIPJQ5W064 366 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 FRMPD2BQ6IN97 320 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 ZNF852Q6ZMS4 543 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 TSPAN33Q86UF1 283 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 CBARPQ8N350 705 aaPredicted RBP17.24■□□□□ 0.35
SPC24-206ENST00000592540 FAM181AQ8N9Y4 354 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 AQP11Q8NBQ7 271 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 VPS35Q96QK1 796 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 PIP5K1AQ99755 562 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 BEX2Q9BXY8 128 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 SLC25A19Q9HC21 320 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 CLEC2DQ9UHP7 191 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 IQCMA0A1B0GVH7 501 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 ERVH48-1M5A8F1 160 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 ENTPD6O75354 484 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 CSO75390 466 aaKnown RBP17.24■□□□□ 0.35
SPC24-206ENST00000592540 TNFRSF21O75509 655 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 EOMESO95936 686 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 CYP17A1P05093 508 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 C1SP09871 688 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 MYL9P24844 172 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 PSMA1P25786 263 aaKnown RBP17.24■□□□□ 0.35
SPC24-206ENST00000592540 ASMTP46597 345 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 HMGA2P52926 109 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 FOXD4Q12950 439 aaPredicted RBP17.24■□□□□ 0.35
SPC24-206ENST00000592540 SCARB2Q14108 478 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 LARS2Q15031 903 aaKnown RBP17.24■□□□□ 0.35
SPC24-206ENST00000592540 TRAF7Q6Q0C0 670 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 FAM131AQ6UXB0 335 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 ZNF783Q6ZMS7 281 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 CAMKMTQ7Z624 323 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 FAM217AQ8IXS0 508 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 VWA5B2Q8N398 1253 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 TRPV1Q8NER1 839 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 C11orf54Q9H0W9 315 aaPredicted RBP17.24■□□□□ 0.35
SPC24-206ENST00000592540 IRF2BPLQ9H1B7 796 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 STUB1Q9UNE7 303 aa17.24■□□□□ 0.35
SPC24-206ENST00000592540 NINQ8N4C6 2090 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 B4DXG7 233 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 GADD45GO95257 159 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 GASTP01350 101 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 ALPPP05187 535 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 ANXA4P09525 319 aaPredicted RBP17.23■□□□□ 0.35
SPC24-206ENST00000592540 POU1F1P28069 291 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 CD83Q01151 205 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 SEMG2Q02383 582 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 ZNF33BQ06732 778 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 GANABQ14697 944 aaKnown RBP17.23■□□□□ 0.35
SPC24-206ENST00000592540 SPHARQ15513 63 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 DUSP7Q16829 419 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 SMUG1Q53HV7 270 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 XKR6Q5GH73 641 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 TRIM69Q86WT6 500 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 CADM2Q8N3J6 435 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 C1orf52Q8N6N3 182 aaKnown RBP17.23■□□□□ 0.35
SPC24-206ENST00000592540 FAM46DQ8NEK8 389 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 NFKBIDQ8NI38 313 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 TRIM39Q9HCM9 518 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 SH3BP4Q9P0V3 963 aa17.23■□□□□ 0.35
SPC24-206ENST00000592540 A0A0B4J293 547 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 ZNF840PA6NDX5 716 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 SMAD6O43541 496 aaKnown RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 SH3BGRLO75368 114 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 CSF3P09919 207 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 MLLT3P42568 568 aaPredicted RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 DGKEP52429 567 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 ELOAQ14241 798 aaKnown RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 DGKKQ5KSL6 1271 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 GCNT6Q5T4J0 391 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 CCDC149Q6ZUS6 474 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 SLC34A3Q8N130 599 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 GEMIN6Q8WXD5 167 aaKnown RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 RNF31Q96EP0 1072 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 IL4I1Q96RQ9 567 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 FZD3Q9NPG1 666 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 MBD1Q9UIS9 605 aaPredicted RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 OR51B4Q9Y5P0 310 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 HELZP42694 1942 aaKnown RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 HYKKA2RU49 373 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 GFYI3L273 518 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 WWP2O00308 870 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 TBL1XO60907 577 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 ETHE1O95571 254 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 ITGB7P26010 798 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 SLC35F1Q5T1Q4 408 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 XKRXQ6PP77 449 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 LAS2Q8IYD9 372 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 FRMD6Q96NE9 622 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 RNF121Q9H920 327 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 NMNAT1Q9HAN9 279 aaPredicted RBP17.22■□□□□ 0.35
SPC24-206ENST00000592540 ABCB9Q9NP78 766 aa17.22■□□□□ 0.35
SPC24-206ENST00000592540 PRAMEF33A0A0G2JMD5 474 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 A0A1W2PQ67 120 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 MGAT4DA6NG13 374 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 RNASET2O00584 256 aaKnown RBP17.21■□□□□ 0.35
SPC24-206ENST00000592540 UGDHO60701 494 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 PRAMEF10O60809 474 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms