RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 QSOX2Q6ZRP7 698 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 LAS2Q8IYD9 372 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 SIRT6Q8N6T7 355 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 TEX9Q8N6V9 391 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 GALNT11Q8NCW6 608 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 UBE2E3Q969T4 207 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 NPLQ9BXD5 320 aaPredicted RBP25.61■■□□□ 1.69
SMAD4-213ENST00000591914 TXLNGYQ9BZA5 131 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 L2HGDHQ9H9P8 463 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 ZNF358Q9NW07 568 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 PCDHGA10Q9Y5H3 936 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 CNTRLQ7Z7A1 2325 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 SCN2AQ99250 2005 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 A0A0G2JN53 185 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 TRIM49D1C9J1S8 452 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 PSMD12O00232 456 aaPredicted RBP25.6■■□□□ 1.69
SMAD4-213ENST00000591914 RIPK2O43353 540 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 COL6A2P12110 1019 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 PCBP2Q15366 365 aaKnown RBP eCLIP25.6■■□□□ 1.696e-7■■■■■ 45.8
SMAD4-213ENST00000591914 BTBD16Q32M84 506 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 TRIM40Q6P9F5 258 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 ABHD17CQ6PCB6 329 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 DNAJB14Q8TBM8 379 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 CPAMD8Q8IZJ3 1885 aa25.6■■□□□ 1.69
SMAD4-213ENST00000591914 A0A088AWK7 358 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 FAM227AF5H4B4 570 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 PRMT3O60678 531 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 RBP1P09455 135 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 ZNF10P21506 573 aaPredicted RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 GCAP28676 217 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 PLA2G16P53816 162 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 BTG2P78543 158 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 RUNX2Q13950 521 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 EXT1Q16394 746 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 TSNAXIP1Q2TAA8 658 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 GRHL2Q6ISB3 625 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 METTL2BQ6P1Q9 378 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 MED27Q6P2C8 311 aa25.59■■□□□ 1.69
SMAD4-213ENST00000591914 PAPD4Q6PIY7 484 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 ZNF473Q8WTR7 871 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 SNRNP40Q96DI7 357 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 CPSF2Q9P2I0 782 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 TNPO3Q9Y5L0 923 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 ASH1LQ9NR48 2969 aaKnown RBP25.59■■□□□ 1.69
SMAD4-213ENST00000591914 IGKV3D-11A0A0A0MRZ8 115 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 LRRC14BA6NHZ5 514 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 VPS4BO75351 444 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 SNRPAP09012 282 aaKnown RBP25.58■■□□□ 1.69
SMAD4-213ENST00000591914 SERPINB1P30740 379 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 OR4D2P58180 307 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 TLR1Q15399 786 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 B3GNTL1Q67FW5 361 aaPredicted RBP25.58■■□□□ 1.69
SMAD4-213ENST00000591914 EIF1ADQ8N9N8 165 aaKnown RBP25.58■■□□□ 1.69
SMAD4-213ENST00000591914 OR7G3Q8NG95 312 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 M1APQ8TC57 530 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 PTCHD1Q96NR3 888 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 F2RL3Q96RI0 385 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 LPAR4Q99677 370 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 MS4A8Q9BY19 250 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 PRDM9Q9NQV7 894 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 VPS4AQ9UN37 437 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 ANGPTL3Q9Y5C1 460 aa25.58■■□□□ 1.69
SMAD4-213ENST00000591914 B3GALT2O43825 422 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 MAOAP21397 527 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 ACTN3Q08043 901 aaPredicted RBP25.57■■□□□ 1.68
SMAD4-213ENST00000591914 ZNF169Q14929 603 aaPredicted RBP25.57■■□□□ 1.68
SMAD4-213ENST00000591914 H3F3CQ6NXT2 135 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 ADGRD1Q6QNK2 874 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 CISD2Q8N5K1 135 aaKnown RBP25.57■■□□□ 1.68
SMAD4-213ENST00000591914 HAS2Q92819 552 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 C19orf60Q96EN9 201 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 CNDP1Q96KN2 507 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 SERINC2Q96SA4 455 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 MMP25Q9NPA2 562 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 PRDM7Q9NQW5 492 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 XPR1Q9UBH6 696 aa25.57■■□□□ 1.68
SMAD4-213ENST00000591914 TCRBV16S1A1N1A0A5B0 115 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 DYTNA2CJ06 578 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 E2F3O00716 465 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 SIX3O95343 332 aaPredicted RBP25.56■■□□□ 1.68
SMAD4-213ENST00000591914 TSFMP43897 325 aaKnown RBP25.56■■□□□ 1.68
SMAD4-213ENST00000591914 PIK3CGP48736 1102 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 MTTPP55157 894 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 TGM3Q08188 693 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 TMEM35AQ53FP2 167 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 LGSNQ5TDP6 509 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 LIPJQ5W064 366 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 GOLGA7Q7Z5G4 137 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 UBE3DQ7Z6J8 389 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 CATSPER1Q8NEC5 780 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 ADAMTS18Q8TE60 1221 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 KCNC2Q96PR1 638 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 BARD1Q99728 777 aaKnown RBP25.56■■□□□ 1.68
SMAD4-213ENST00000591914 RNF32Q9H0A6 362 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 EPB41L4BQ9H329 900 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 NECTIN3Q9NQS3 549 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 ASF1BQ9NVP2 202 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 TMCO1Q9UM00 188 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 TSC22D4Q9Y3Q8 395 aa25.56■■□□□ 1.68
SMAD4-213ENST00000591914 MMACHCQ9Y4U1 282 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms