RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TTLQ8NG68 377 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 TRPC4APQ8TEL6 797 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 TBC1D20Q96BZ9 403 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 PITHD1Q9GZP4 211 aaPredicted RBP10.86□□□□□ -0.67
VMP1-211ENST00000591315 REXO4Q9GZR2 422 aaKnown RBP10.86□□□□□ -0.67
VMP1-211ENST00000591315 PRM3Q9NNZ6 103 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 MLXIPLQ9NP71 852 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 DMRT3Q9NQL9 472 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 PRDM7Q9NQW5 492 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 C14orf105Q9NVL8 296 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 PLAAQ9Y263 795 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 TNPO3Q9Y5L0 923 aaKnown RBP10.86□□□□□ -0.67
VMP1-211ENST00000591315 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 LOC102723996A0A087X1L8 192 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 IGHV1-45A0A0A0MS14 117 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 MYOCOSA0A1B0GUC4 107 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 MAGEB17A8MXT2 336 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 G3V2L1 256 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 TGFBR3LH3BV60 316 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 CDH16O75309 829 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 SEC24DO94855 1032 aaPredicted RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 IGHEP01854 428 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 FHP07954 510 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 C8orf89P0DMQ9 161 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 KRT4P19013 534 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 ARL1P40616 181 aaPredicted RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 CD97P48960 835 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 CCNG1P51959 295 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 RRADP55042 308 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 STXBP1P61764 594 aaKnown RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 SLC18A2Q05940 514 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 RASA2Q15283 850 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 HIST2H2ACQ16777 129 aaPredicted RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 TUBB8Q3ZCM7 444 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 SGO1Q5FBB7 561 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 ZNF678Q5SXM1 525 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 LIPJQ5W064 366 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 HIST2H2AA3Q6FI13 130 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 ANKRD37Q7Z713 158 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 L3MBTL4Q8NA19 623 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 OR2L5Q8NG80 312 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 OR4F6Q8NGB9 312 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 WDR20Q8TBZ3 569 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 ATP6V1E2Q96A05 226 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 FER1L6-AS2Q96M78 137 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 IP6K3Q96PC2 410 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 CSF3RQ99062 836 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 WDR77Q9BQA1 342 aaPredicted RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 ZNF552Q9H707 407 aaPredicted RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 ATP13A2Q9NQ11 1180 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 NECTIN3Q9NQS3 549 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 FARSBQ9NSD9 589 aaKnown RBP10.85□□□□□ -0.67
VMP1-211ENST00000591315 GPR83Q9NYM4 423 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 LUZP4Q9P127 313 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 TUBD1Q9UJT1 453 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 TMCO1Q9UM00 188 aa10.85□□□□□ -0.67
VMP1-211ENST00000591315 MYO18BQ8IUG5 2567 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 URADA6NGE7 173 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 H0YIV9 168 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 PLIN3O60664 434 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 GLRA3O75311 464 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 SPAG7O75391 227 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 SUPT7LO94864 414 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 OR4F21O95013 312 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 CLDN9O95484 217 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 HPP00738 406 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 GSTA1P08263 222 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 RNH1P13489 461 aaKnown RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 MAOAP21397 527 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 ATP5F1P24539 256 aaPredicted RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 ATP5A1P25705 553 aaKnown RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 ITGA3P26006 1051 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 PPP2R1BP30154 601 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 CRHR1P34998 444 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 ST13P50502 369 aaKnown RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 PGDP52209 483 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 PRKAA2P54646 552 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 HERVK_113P63132 956 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 CLCQ05315 142 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 IFFO1Q0D2I5 559 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 ABRAXAS2Q15018 415 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 NADK2Q4G0N4 442 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 DEPDC1Q5TB30 811 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 KHDRBS2Q5VWX1 349 aaKnown RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 TCTN3Q6NUS6 607 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 ZYG11AQ6WRX3 759 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 NDUFAF7Q7L592 441 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 TRABD2AQ86V40 505 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 MREGQ8N565 214 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 FAM47BQ8NA70 645 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 CLEC1AQ8NC01 280 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 THOC3Q96J01 351 aaKnown RBP10.84□□□□□ -0.67
VMP1-211ENST00000591315 FAR2Q96K12 515 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 HBEGFQ99075 208 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 MAPKAP1Q9BPZ7 522 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 C1QTNF3Q9BXJ4 246 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 ERVK-6Q9BXR3 956 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms