RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 FARSBQ9NSD9 589 aaKnown RBP20.35■□□□□ 0.85
R3HDM4-206ENST00000590454 CROTQ9UKG9 612 aa20.35■□□□□ 0.85
R3HDM4-206ENST00000590454 LRIT2A6NDA9 550 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 CLEC3AO75596 197 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 KLK3P07288 261 aaPredicted RBP20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 CCNYL3P0C7X3 344 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 GNLYP22749 145 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 FOXA1P55317 472 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 RAB8AP61006 207 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 DCDP81605 110 aaKnown RBP20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 RGS1Q08116 209 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 GGTA1PQ4G0N0 100 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 SGO1Q5FBB7 561 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 GARNL3Q5VVW2 1013 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 NUDCD3Q8IVD9 361 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 CDYL2Q8N8U2 506 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 TTLQ8NG68 377 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 OR6Y1Q8NGX8 325 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 PROKR1Q8TCW9 393 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 UTP15Q8TED0 518 aaKnown RBP20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 UBE2E3Q969T4 207 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 F2RL3Q96RI0 385 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 PAIP2Q9BPZ3 127 aaKnown RBP20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 DRC3Q9H069 523 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 POLHQ9Y253 713 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 NBPF19A0A087WUL8 3843 aa20.34■□□□□ 0.85
R3HDM4-206ENST00000590454 A0A0G2JN53 185 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 TTLL8A6PVC2 850 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 SGK494L7N484 410 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 CNOT3O75175 753 aaKnown RBP20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 MLYCDO95822 493 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 TGFB1P01137 390 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 CHRNGP07510 517 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 SMIM10L1P0DMW3 83 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 HPDP32754 393 aaPredicted RBP20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 DLSTP36957 453 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 ERV3-1Q14264 604 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 SYT16Q17RD7 645 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 AFAP1L2Q8N4X5 818 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 MS4A6EQ96DS6 147 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 SMIM10Q96HG1 83 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 MS4A8Q9BY19 250 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 OR51B5Q9H339 312 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 DMRT3Q9NQL9 472 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 TRPS1Q9UHF7 1281 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 TIMM22Q9Y584 194 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 PCDHGA11Q9Y5H2 935 aa20.33■□□□□ 0.85
R3HDM4-206ENST00000590454 NOTCH2Q04721 2471 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 ZNF860A6NHJ4 632 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 MAGEB17A8MXT2 336 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 SAP18O00422 153 aaKnown RBP20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 KLHL18O94889 574 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 ETHE1O95571 254 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 HTR6P50406 440 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 PKNOX1P55347 436 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 RPS13P62277 151 aaKnown RBP20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 MAT1AQ00266 395 aaKnown RBP20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 FAM53BQ14153 422 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 NDUFA9Q16795 377 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 ADPRMQ3LIE5 342 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 DEFB134Q4QY38 66 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 FRG2Q64ET8 278 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 UBE3DQ7Z6J8 389 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 GOLGA6L1Q8N7Z2 621 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 AMER3Q8N944 861 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 MMABQ96EY8 250 aaPredicted RBP20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 SEC16BQ96JE7 1060 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 FRG2BQ96QU4 278 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 HBEGFQ99075 208 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 ZNF395Q9H8N7 513 aaPredicted RBP20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 NAALAD2Q9Y3Q0 740 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 TSC22D4Q9Y3Q8 395 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 SLC22A7Q9Y694 548 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 CCDC88CQ9P219 2028 aa20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 SPTAN1Q13813 2472 aaKnown RBP20.32■□□□□ 0.84
R3HDM4-206ENST00000590454 MANBAO00462 879 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 BIRC5O15392 142 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 ESRRBO95718 433 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 ONECUT2O95948 504 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 PDYNP01213 254 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 ALOX12P18054 663 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 AGXTP21549 392 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 BGNP21810 368 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 GSTM2P28161 218 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 PIK3CBP42338 1070 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 SLC18A1P54219 525 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 RPS18P62269 152 aaKnown RBP20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 CHI3L2Q15782 390 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 ARL13AQ5H913 290 aaPredicted RBP20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 HHATQ5VTY9 493 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 MLIPQ5VWP3 458 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 TTC19Q6DKK2 380 aaPredicted RBP20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 OR5T3Q8NGG3 340 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 METTL6Q8TCB7 284 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 CPT1CQ8TCG5 803 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 CNDP1Q96KN2 507 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 ZNF304Q9HCX3 659 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 PRM3Q9NNZ6 103 aa20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 IFT80Q9P2H3 777 aaPredicted RBP20.31■□□□□ 0.84
R3HDM4-206ENST00000590454 CTSFQ9UBX1 484 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms