RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 A0A087WUV0 522 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-227ENST00000590188 DYTNA2CJ06 578 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 MAGEB17A8MXT2 336 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 TCP11X1B4DZS4 312 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 TRIM49D1C9J1S8 452 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 CLEC3AO75596 197 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 CYC1P08574 325 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 ICAM2P13598 275 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 CERS1P27544 350 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 LAPTM5Q13571 262 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 DDX39BQ13838 428 aaKnown RBP16.94■□□□□ 0.3
CIRBP-227ENST00000590188 ACAP2Q15057 778 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 NR6A1Q15406 480 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 PAGE2BQ5JRK9 111 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 TRIM40Q6P9F5 258 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 TAOK1Q7L7X3 1001 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 RNF175Q8N4F7 328 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 FAM47BQ8NA70 645 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 GALNT11Q8NCW6 608 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 OR1N1Q8NGS0 311 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 RHEBL1Q8TAI7 183 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 DCAKDQ8WVC6 231 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 WDR34Q96EX3 536 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 GPR78Q96P69 363 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 LMF1Q96S06 567 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 LPAR4Q99677 370 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 KCNK13Q9HB14 408 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 NECTIN3Q9NQS3 549 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 COPG2Q9UBF2 871 aa16.94■□□□□ 0.3
CIRBP-227ENST00000590188 COPG1Q9Y678 874 aaKnown RBP16.94■□□□□ 0.3
CIRBP-227ENST00000590188 NBASA2RRP1 2371 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 EXOC1LA0A1B0GW35 172 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 B3GALT2O43825 422 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 PRMT3O60678 531 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 SIX3O95343 332 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-227ENST00000590188 WDPCPO95876 746 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 FAM153BP0C7A2 387 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 EPB42P16452 691 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 GSTM2P28161 218 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 SERPINB9P50453 376 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 SRSF1Q07955 248 aaKnown RBP eCLIP16.93■□□□□ 0.31e-11■■□□□ 12.7
CIRBP-227ENST00000590188 SETDB1Q15047 1291 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 FAM153CQ494X1 144 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 TECRLQ5HYJ1 363 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 PLAG1Q6DJT9 500 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 CCDC91Q7Z6B0 441 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 OR2L5Q8NG80 312 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 SLC29A3Q9BZD2 475 aa16.93■□□□□ 0.3
CIRBP-227ENST00000590188 PITHD1Q9GZP4 211 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-227ENST00000590188 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.93■□□□□ 0.3
CIRBP-227ENST00000590188 COPS7BQ9H9Q2 264 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-227ENST00000590188 MYO18BQ8IUG5 2567 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 SHANK1Q9Y566 2161 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 SAP18O00422 153 aaKnown RBP16.92■□□□□ 0.3
CIRBP-227ENST00000590188 RTCAO00442 366 aaKnown RBP16.92■□□□□ 0.3
CIRBP-227ENST00000590188 KRT38O76015 456 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 TGFB1P01137 390 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 HNRNPFP52597 415 aaKnown RBP16.92■□□□□ 0.3
CIRBP-227ENST00000590188 AP2B1P63010 937 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 TLR1Q15399 786 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 TBCCQ15814 346 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 EIF2S3LQ2VIR3 472 aaKnown RBP16.92■□□□□ 0.3
CIRBP-227ENST00000590188 MED27Q6P2C8 311 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 ABHD17CQ6PCB6 329 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 QSOX2Q6ZRP7 698 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 PTGR2Q8N8N7 351 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-227ENST00000590188 TMEM52Q8NDY8 209 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 PHF21BQ96EK2 531 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 QRFPRQ96P65 431 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 XPR1Q9UBH6 696 aa16.92■□□□□ 0.3
CIRBP-227ENST00000590188 A0A088AWK7 358 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 MYOCOSA0A1B0GUC4 107 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 MAN1A2O60476 641 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ZNF10P21506 573 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ARL1P40616 181 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 MAGEA12P43365 314 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 TSFMP43897 325 aaKnown RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 RAB38P57729 211 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 SLC26A5P58743 744 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 SRSF11Q05519 484 aaKnown RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 UBAP2LQ14157 1087 aaKnown RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 NAA30Q147X3 362 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 EXT1Q16394 746 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ADPRMQ3LIE5 342 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 GOLGA7Q7Z5G4 137 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 CLNKQ7Z7G1 428 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 KIF2BQ8N4N8 673 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 M1APQ8TC57 530 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ZNF473Q8WTR7 871 aaKnown RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ISL2Q96A47 359 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 CSF3RQ99062 836 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 MS4A8Q9BY19 250 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ACTR8Q9H981 624 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 CLK4Q9HAZ1 481 aaKnown RBP16.91■□□□□ 0.3
CIRBP-227ENST00000590188 PRDM9Q9NQV7 894 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 PRTFDC1Q9NRG1 225 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 ANKRD10Q9NXR5 420 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms