RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 DEFB110Q30KQ9 67 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 SLC2A7Q6PXP3 512 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 CAMKMTQ7Z624 323 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 ARHGAP24Q8N264 748 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 SUMF1Q8NBK3 374 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 OR8J2Q8NGG1 315 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 OR8K5Q8NH50 307 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 PRPF18Q99633 342 aaKnown RBP16.58■□□□□ 0.25
CXXC1-212ENST00000589940 THTPAQ9BU02 230 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 NLNQ9BYT8 704 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 REEP4Q9H6H4 257 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 PDE7BQ9NP56 450 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 GID8Q9NWU2 228 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 SEMA5BQ9P283 1151 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 EXO1Q9UQ84 846 aaKnown RBP16.58■□□□□ 0.25
CXXC1-212ENST00000589940 BTBD3Q9Y2F9 522 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 GABRR3A8MPY1 467 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 MAP3K7O43318 606 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 SRPX2O60687 465 aaPredicted RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 SCELO95171 688 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 ATP5A1P25705 553 aaKnown RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 RPL3P39023 403 aaKnown RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 GRK6P43250 576 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 TRA2BP62995 288 aaKnown RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 PHC1P78364 1004 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 DAB2P98082 770 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 C2orf80Q0P641 193 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 MAPKAPK3Q16644 382 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 TRMT5Q32P41 509 aaKnown RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 INAVAQ3KP66 663 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 CPTPQ5TA50 214 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 DBX2Q6ZNG2 339 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 MSANTD1Q6ZTZ1 278 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 ABHD13Q7L211 337 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 DGLUCYQ7Z3D6 616 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 R3HCC1LQ7Z5L2 792 aaKnown RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 GPR180Q86V85 440 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 ZCCHC7Q8N3Z6 543 aaKnown RBP16.58■□□□□ 0.24
CXXC1-212ENST00000589940 AMER3Q8N944 861 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 ACOT4Q8N9L9 421 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 TM4SF18Q96CE8 201 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 TMEM9Q9P0T7 183 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 ATP6V1HQ9UI12 483 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 CROTQ9UKG9 612 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 RP1P56715 2156 aa16.58■□□□□ 0.24
CXXC1-212ENST00000589940 FURINP09958 794 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 SMIM10L1P0DMW3 83 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 DUSP3P51452 185 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PDE7AQ13946 482 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 NFYCQ13952 458 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 SLC9A5Q14940 896 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 TMEM214Q6NUQ4 689 aaKnown RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 C8orf82Q6P1X6 216 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PRSS42Q7Z5A4 293 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 ZCCHC10Q8TBK6 192 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 MTERF3Q96E29 417 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 SMIM10Q96HG1 83 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 NUDT22Q9BRQ3 303 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 ROGDIQ9GZN7 287 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 COPS7BQ9H9Q2 264 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PCDHGA7Q9Y5G6 932 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 FXYD1O00168 92 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 TXNDC9O14530 226 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 CASC3O15234 703 aaKnown RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 NPPAP01160 153 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF806P0C7X5 589 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PIM1P11309 404 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 GABRA4P48169 554 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PSME3P61289 254 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 BTN3A2P78410 334 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 MC1RQ01726 317 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 KLC1Q07866 573 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 ANKRD26P1Q6NSI1 321 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 IFI44Q8TCB0 444 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 GTF2H4Q92759 462 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 LRRC58Q96CX6 371 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 COQ8BQ96D53 544 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PRRX2Q99811 253 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 HOPXQ9BPY8 73 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 RMND5AQ9H871 391 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 IL1RL2Q9HB29 575 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PRPF19Q9UMS4 504 aaKnown RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 PLCL2Q9UPR0 1127 aa16.57■□□□□ 0.24
CXXC1-212ENST00000589940 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.57■□□□□ 0.24
CXXC1-212ENST00000589940 RPLP0P05388 317 aaKnown RBP16.56■□□□□ 0.24
CXXC1-212ENST00000589940 FAM58BPP0C7Q3 252 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 LAMP1P11279 417 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 CERS1P27544 350 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 HSD11B2P80365 405 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 FOXM1Q08050 763 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 TCF15Q12870 199 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 SLAMF1Q13291 335 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 HEPACAMQ14CZ8 416 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 WASHC2DQ5SRD0 308 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 OR4F3Q6IEY1 312 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 MRM1Q6IN84 353 aaKnown RBP16.56■□□□□ 0.24
CXXC1-212ENST00000589940 TMEM71Q6P5X7 295 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 BNC2Q6ZN30 1099 aaPredicted RBP16.56■□□□□ 0.24
CXXC1-212ENST00000589940 DHDDSQ86SQ9 333 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF285Q96NJ3 590 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms