RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ADRA1AP35348 466 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 HLCSP50747 726 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 WNT3P56703 355 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 SORDQ00796 357 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 IFFO1Q0D2I5 559 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 BRD3Q15059 726 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 EXT1Q16394 746 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 HKDC1Q2TB90 917 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 SPANXN3Q5MJ09 141 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 KCTD11Q693B1 232 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 HIST2H2BDQ6DRA6 164 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 KIAA0930Q6ICG6 404 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 BHLHB9Q6PI77 547 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 PAPD4Q6PIY7 484 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 RANBP10Q6VN20 620 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 TRMT10CQ7L0Y3 403 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 SDCCAG8Q86SQ7 713 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 CLDN19Q8N6F1 224 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 OR6P1Q8NGX9 317 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ELP5Q8TE02 316 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CREB3L4Q8TEY5 395 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ZNF669Q96BR6 464 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 MVB12AQ96EY5 273 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 MMABQ96EY8 250 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 CFAP36Q96G28 342 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CABS1Q96KC9 395 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CCL19Q99731 98 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 EBNA1BP2Q99848 306 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 C19orf43Q9BQ61 176 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 FAM167BQ9BTA0 163 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 SGPP1Q9BX95 441 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CCDC68Q9H2F9 335 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ACBD3Q9H3P7 528 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ASB8Q9H765 288 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 PPANQ9NQ55 473 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 YAE1D1Q9NRH1 226 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 NSMCE4AQ9NXX6 385 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 POLG2Q9UHN1 485 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 FKBPLQ9UIM3 349 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CHMP2BQ9UQN3 213 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 RUVBL1Q9Y265 456 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 TCAF1Q9Y4C2 921 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 KLK4Q9Y5K2 254 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ARL5AQ9Y689 179 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 VWFP04275 2813 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 UQCRHLA0A096LP55 91 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 A0A0G2JK05 382 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 KRT87PA6NCN2 255 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 GOLGA6L10A6NI86 522 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 TARM1B6A8C7 271 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 H0YGG7 62 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 KLRC4-KLRK1H3BQV0 150 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 CDK2AP1O14519 115 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 WDR1O75083 606 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 GLSO94925 669 aaPredicted RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 S1PR4O95977 384 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 TPH1P17752 444 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 EGR1P18146 543 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 IVDP26440 423 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 ELK3P41970 407 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 MAGEA4P43358 317 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 CDKN1CP49918 316 aaPredicted RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 ZNF136P52737 540 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 EMP3P54852 163 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 MLF1P58340 268 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 SLC26A5P58743 744 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 ARF3P61204 181 aaPredicted RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 PPIAP62937 165 aaKnown RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 DHX9Q08211 1270 aaKnown RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 USP10Q14694 798 aaKnown RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 SF1Q15637 639 aaKnown RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 FASTKD1Q53R41 847 aaKnown RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 SFT2D3Q587I9 215 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 ANKRD22Q5VYY1 191 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 MRNIPQ6NTE8 343 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 FBXO42Q6P3S6 717 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 AFTPHQ6ULP2 937 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 TRILQ7L0X0 811 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 PRSS41Q7RTY9 318 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 CROCCP2Q86T23 111 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 RPS19BP1Q86WX3 136 aaKnown RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 KLHDC8BQ8IXV7 354 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 LMNTD2Q8IXW0 634 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 ARMC10Q8N2F6 343 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 GOLGA6L1Q8N7Z2 621 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 FBXO36Q8NEA4 188 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 TNIP2Q8NFZ5 429 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 GSDMBQ8TAX9 411 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 HEXDCQ8WVB3 486 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 UBLCP1Q8WVY7 318 aaPredicted RBP5.66□□□□□ -1.5
VPS25-204ENST00000589577 METTL21AQ8WXB1 218 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 ULK4Q96C45 1275 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 DCUN1D1Q96GG9 259 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 PKNOX2Q96KN3 472 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 PIGQQ9BRB3 760 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 TSSK1BQ9BXA7 367 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 PARD6BQ9BYG5 372 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 AMBRA1Q9C0C7 1298 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 FAM96AQ9H5X1 160 aa5.66□□□□□ -1.5
VPS25-204ENST00000589577 PPCSQ9HAB8 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms