RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 PAPD4Q6PIY7 484 aaKnown RBP16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 OR2L5Q8NG80 312 aa16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 DNAJB14Q8TBM8 379 aa16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 CCT6BQ92526 530 aa16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 C19orf60Q96EN9 201 aa16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 BARD1Q99728 777 aaKnown RBP16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 NPLQ9BXD5 320 aaPredicted RBP16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 REXO4Q9GZR2 422 aaKnown RBP16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 VPS11Q9H270 941 aa16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 IKBKGQ9Y6K9 419 aa16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 RP1L1Q8IWN7 2480 aaPredicted RBP16.88■□□□□ 0.29
ATP6V0A1-220ENST00000588901 A0A0G2JN53 185 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PSMD12O00232 456 aaPredicted RBP16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 B4GALT2O60909 372 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 KRT38O76015 456 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 GFAPP14136 432 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 GNLYP22749 145 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TSFMP43897 325 aaKnown RBP16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ZNF169Q14929 603 aaPredicted RBP16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 HIST2H2ACQ16777 129 aaPredicted RBP16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PFKFB4Q16877 469 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 HIST2H2AA3Q6FI13 130 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 LAS2Q8IYD9 372 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PLD6Q8N2A8 252 aaKnown RBP16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 CISD2Q8N5K1 135 aaKnown RBP16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 FAR2Q96K12 515 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 CNDP1Q96KN2 507 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 RNF32Q9H0A6 362 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ASF1BQ9NVP2 202 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 NTNG1Q9Y2I2 539 aa16.87■□□□□ 0.29
ATP6V0A1-220ENST00000588901 A0A088AWK7 358 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 DYTNA2CJ06 578 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TCP11X1B4DZS4 312 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 FAM227AF5H4B4 570 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 POC1B-GALNT4F8VUJ3 575 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PRMT3O60678 531 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 RHOXF2BP0C7M4 288 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 EPB42P16452 691 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ZNF10P21506 573 aaPredicted RBP16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MSH2P43246 934 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TNFSF10P50591 281 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PLA2G16P53816 162 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 OR4D2P58180 307 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ARG2P78540 354 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 BTG2P78543 158 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 SRSF1Q07955 248 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 RUNX2Q13950 521 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PCBP2Q15366 365 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 GRHL2Q6ISB3 625 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 H3F3CQ6NXT2 135 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TRIM40Q6P9F5 258 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ABHD17CQ6PCB6 329 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TRMT10CQ7L0Y3 403 aaKnown RBP16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TEX9Q8N6V9 391 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 M1APQ8TC57 530 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ZNF473Q8WTR7 871 aaKnown RBP16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 HAS2Q92819 552 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 UBE2E3Q969T4 207 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PTCHD1Q96NR3 888 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 LPAR4Q99677 370 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 RHOXF2Q9BQY4 288 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MS4A8Q9BY19 250 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 SLC29A3Q9BZD2 475 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MMP25Q9NPA2 562 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PRDM9Q9NQV7 894 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ZNF358Q9NW07 568 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MAP10Q9P2G4 905 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 CPAMD8Q8IZJ3 1885 aa16.86■□□□□ 0.29
ATP6V0A1-220ENST00000588901 EXOC1LA0A1B0GW35 172 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TCRBV16S1A1N1A0A5B0 115 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 LRRC14BA6NHZ5 514 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 B3GALT2O43825 422 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 UQCRHP07919 91 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 COL6A2P12110 1019 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MAOAP21397 527 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 GCAP28676 217 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 SERPINB1P30740 379 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 SLC26A5P58743 744 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ACTN3Q08043 901 aaPredicted RBP16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 METTL2BQ6P1Q9 378 aaKnown RBP16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MED27Q6P2C8 311 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 UBE3DQ7Z6J8 389 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 SCUBE1Q8IWY4 988 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 CATSPER1Q8NEC5 780 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 OR7G3Q8NG95 312 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 ADAMTS18Q8TE60 1221 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 F2RL3Q96RI0 385 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 SERINC2Q96SA4 455 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TXLNGYQ9BZA5 131 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 NECTIN3Q9NQS3 549 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 PLA2G3Q9NZ20 509 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 CPSF2Q9P2I0 782 aaKnown RBP16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 MMACHCQ9Y4U1 282 aa16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TNPO3Q9Y5L0 923 aaKnown RBP16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 COPG1Q9Y678 874 aaKnown RBP16.85■□□□□ 0.29
ATP6V0A1-220ENST00000588901 TRIM49D1C9J1S8 452 aa16.84■□□□□ 0.29
ATP6V0A1-220ENST00000588901 E2F3O00716 465 aa16.84■□□□□ 0.29
ATP6V0A1-220ENST00000588901 RIPK2O43353 540 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms