RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CAMKVQ8NCB2 501 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ZBTB44Q8NCP5 570 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 RERGQ96A58 199 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 PPCDCQ96CD2 204 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TM4SF18Q96CE8 201 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TM4SF19Q96DZ7 209 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF764Q96H86 408 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 CCDC115Q96NT0 180 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ANKRD27Q96NW4 1050 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TRAPPC9Q96Q05 1148 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 INPP5KQ9BT40 448 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TRIM8Q9BZR9 551 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ALG2Q9H553 416 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 RNPEPL1Q9HAU8 725 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 MIEF1Q9NQG6 463 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 SH3BP4Q9P0V3 963 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 GMPR2Q9P2T1 348 aaKnown RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 BCAP29Q9UHQ4 241 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 BTNL2Q9UIR0 455 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 USP34Q70CQ2 3546 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 PRSS51A0A1B0GVH4 220 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 H0Y3Z8 333 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 P2RX6O15547 441 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 NUDT21O43809 227 aaKnown RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 PRAMEF10O60809 474 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 DNAJA2O60884 412 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 FKBP6O75344 327 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 KRT36O76013 467 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 ANP32DO95626 131 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CFIP05156 583 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 SP9P0CG40 484 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 DDX5P17844 614 aaKnown RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 ATP5A1P25705 553 aaKnown RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CERS1P27544 350 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 MSX2P35548 267 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CDKN2CP42773 168 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 GSK3BP49841 420 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 RAB8AP61006 207 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 TRAP1Q12931 704 aaKnown RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 HEPACAMQ14CZ8 416 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 MUM1Q2TAK8 710 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 RUNDC3AQ59EK9 446 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 FRMPD2BQ6IN97 320 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 TICAM1Q8IUC6 712 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CLECL1Q8IZS7 167 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF655Q8N720 491 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 ENDOVQ8N8Q3 282 aaKnown RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 AMER3Q8N944 861 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 KCT2Q8NC54 265 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 VPS37AQ8NEZ2 397 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 BHLHE22Q8NFJ8 381 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 OR8K5Q8NH50 307 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CEP76Q8TAP6 659 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 UTP15Q8TED0 518 aaKnown RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 MIEF2Q96C03 454 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 GBP5Q96PP8 586 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 PANX1Q96RD7 426 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 SH3GL1Q99961 368 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 KCTD14Q9BQ13 255 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CPPED1Q9BRF8 314 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 DUSP23Q9BVJ7 150 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 RAB33BQ9H082 229 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 EPB41L1Q9H4G0 881 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 DCLRE1BQ9H816 532 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 COPS7BQ9H9Q2 264 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 CAPN10Q9HC96 672 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 PRDM7Q9NQW5 492 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 C1GALT1Q9NS00 363 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 SLC6A13Q9NSD5 602 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 TEX10Q9NXF1 929 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-205ENST00000588745 NLGN3Q9NZ94 848 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 LRIT1Q9P2V4 623 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 PCDHB14Q9Y5E9 798 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 KMT2EQ8IZD2 1858 aa10.85□□□□□ -0.67
SMAD4-205ENST00000588745 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 CROCCQ5TZA2 2017 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 LOC105369274A0A096LPK9 316 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 LOC102723532A0A0G2JNH3 316 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 TLCD2A6NGC4 264 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 URADA6NGE7 173 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 SLC9B1P1A6NJY1 282 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 H0YGG7 62 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ZSCAN9O15535 394 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 SH3BP5O60239 455 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 CPSF4O95639 269 aaKnown RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 GSNP06396 782 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 FAM58BPP0C7Q3 252 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF888P0CJ79 500 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ALPPL2P10696 532 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 GLB1P16278 677 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 PPM1FP49593 454 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ERFP50548 548 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 GFERP55789 205 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ARF3P61204 181 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 SLC9A5Q14940 896 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 NR1D2Q14995 579 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 SUZ12Q15022 739 aaKnown RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 RCN1Q15293 331 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms