RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ACMSDQ8TDX5 336 aa18.1■□□□□ 0.49
CIRBP-217ENST00000588230 ATP6V1E2Q96A05 226 aa18.1■□□□□ 0.49
CIRBP-217ENST00000588230 THOC3Q96J01 351 aaKnown RBP18.1■□□□□ 0.49
CIRBP-217ENST00000588230 ZNF700Q9H0M5 742 aa18.1■□□□□ 0.49
CIRBP-217ENST00000588230 ZNF552Q9H707 407 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-217ENST00000588230 PPCSQ9HAB8 311 aa18.1■□□□□ 0.49
CIRBP-217ENST00000588230 LANCL2Q9NS86 450 aa18.1■□□□□ 0.49
CIRBP-217ENST00000588230 C4orf51C9J302 202 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 GOLGA8RI6L899 631 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 E2F3O00716 465 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 B4GALT2O60909 372 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 SORBS2O94875 1100 aaKnown RBP18.09■□□□□ 0.49
CIRBP-217ENST00000588230 TBX6O95947 436 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-217ENST00000588230 SHBGP04278 402 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 SERPINB1P30740 379 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 ARL1P40616 181 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-217ENST00000588230 SLCO1A2P46721 670 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 VSNL1P62760 191 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 Q0VFX4 171 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 NSDHLQ15738 373 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 ADPRMQ3LIE5 342 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 AGAP7PQ5VUJ5 663 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 LANCL3Q6ZV70 420 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 CPEB2Q7Z5Q1 589 aaKnown RBP18.09■□□□□ 0.49
CIRBP-217ENST00000588230 LCA5Q86VQ0 697 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 KBTBD2Q8IY47 623 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 PLPP5Q8NEB5 264 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 ZNF473Q8WTR7 871 aaKnown RBP18.09■□□□□ 0.49
CIRBP-217ENST00000588230 MIB2Q96AX9 1013 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 AGAP4Q96P64 663 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 F2RL3Q96RI0 385 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 COPS7BQ9H9Q2 264 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-217ENST00000588230 TMEM216Q9P0N5 145 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 ADGRE2Q9UHX3 823 aa18.09■□□□□ 0.49
CIRBP-217ENST00000588230 SMIM23A6NLE4 172 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 B3GALT2O43825 422 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 UGDHO60701 494 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 PYGBP11216 843 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 ICAM2P13598 275 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 TAC1P20366 129 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 MLLT10P55197 1068 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 RHAGQ02094 409 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 DDX39BQ13838 428 aaKnown RBP18.08■□□□□ 0.48
CIRBP-217ENST00000588230 ABRAXAS2Q15018 415 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 PCOLCEQ15113 449 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 ABHD17CQ6PCB6 329 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 CHSY3Q70JA7 882 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 CA13Q8N1Q1 262 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 RBMXL3Q8N7X1 1067 aaKnown RBP18.08■□□□□ 0.48
CIRBP-217ENST00000588230 SRFBP1Q8NEF9 429 aaKnown RBP18.08■□□□□ 0.48
CIRBP-217ENST00000588230 TM9SF4Q92544 642 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 REPS1Q96D71 796 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 CMTM7Q96FZ5 175 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 QRFPRQ96P65 431 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 TUBB6Q9BUF5 446 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 NPLQ9BXD5 320 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-217ENST00000588230 MS4A8Q9BY19 250 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 NOL11Q9H8H0 719 aaKnown RBP18.08■□□□□ 0.48
CIRBP-217ENST00000588230 PLAAQ9Y263 795 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 PCDHGA11Q9Y5H2 935 aa18.08■□□□□ 0.48
CIRBP-217ENST00000588230 USP9XQ93008 2570 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-217ENST00000588230 IGHV3-20A0A0C4DH32 117 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 MAGEB17A8MXT2 336 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 FAM227AF5H4B4 570 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 PRMT3O60678 531 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 SH3BGRLO75368 114 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 SEC24DO94855 1032 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-217ENST00000588230 CLDN9O95484 217 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 TGFB1P01137 390 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 SERPINA7P05543 415 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 KRT15P19012 456 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 HSD17B3P37058 310 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 CD97P48960 835 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 CCNG1P51959 295 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 MTTPP55157 894 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 AP2B1P63010 937 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 PHEXP78562 749 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 ACTN3Q08043 901 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-217ENST00000588230 RUNX2Q13950 521 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 CPSF6Q16630 551 aaKnown RBP eCLIP18.07■□□□□ 0.48
CIRBP-217ENST00000588230 TMEM35AQ53FP2 167 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 ANKRD37Q7Z713 158 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 TMEM151AQ8N4L1 468 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 ZADH2Q8N4Q0 377 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 Q8NA96 180 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 MZB1Q8WU39 189 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 PTCHD1Q96NR3 888 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 KCNC2Q96PR1 638 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 SERINC2Q96SA4 455 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 MFRPQ9BY79 579 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 ROGDIQ9GZN7 287 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.07■□□□□ 0.481e-9■□□□□ 8.6
CIRBP-217ENST00000588230 DCDC2Q9UHG0 476 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 PCTPQ9UKL6 214 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 RNF11Q9Y3C5 154 aa18.07■□□□□ 0.48
CIRBP-217ENST00000588230 V9GYY5 206 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-217ENST00000588230 RP1L1Q8IWN7 2480 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-217ENST00000588230 SHANK1Q9Y566 2161 aa18.06■□□□□ 0.48
CIRBP-217ENST00000588230 A0A1W2PPM1 405 aa18.06■□□□□ 0.48
CIRBP-217ENST00000588230 A8MT66 165 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms