RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 KLF8O95600 359 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 ABCB1P08183 1280 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 HOXC4P09017 264 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 GPR89BP0CG08 455 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 THRBP10828 461 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HLA-EP13747 358 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 DRD2P14416 443 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HOXB2P14652 356 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ATP6V1B1P15313 513 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 NME1P15531 152 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 NCK1P16333 377 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 AMD1P17707 334 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 EPORP19235 508 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 TEAD1P28347 426 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 NUDT1P36639 197 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HSD17B2P37059 387 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HPCAL1P37235 193 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ETV3P41162 512 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 P2RY2P41231 377 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HALP42357 657 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 PREPP48147 710 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 CDK9P50750 372 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 ARHGDIAP52565 204 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ARSFP54793 590 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 MTPNP58546 118 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 PFN3P60673 137 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 PHEXP78562 749 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ADARB1P78563 741 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 HMGCS1Q01581 520 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ACSM2AQ08AH3 577 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 CNTN1Q12860 1018 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 TMEM115Q12893 351 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 CHIT1Q13231 466 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 GTF2H3Q13889 308 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 VEZF1Q14119 521 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 E2F2Q14209 437 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
SDF2-206ENST00000587788 PTGR1Q14914 329 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 NUMA1Q14980 2115 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 LPAL2Q16609 132 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HIST2H2ACQ16777 129 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZNF528Q3MIS6 628 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZBED5Q49AG3 693 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SPIN4Q56A73 249 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SGO1Q5FBB7 561 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 XKR6Q5GH73 641 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZC3H12BQ5HYM0 836 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 PAGE2BQ5JRK9 111 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SPANXN4Q5MJ08 99 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 RBM48Q5RL73 367 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 ACSM2BQ68CK6 577 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 HIST2H2AA3Q6FI13 130 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 KIAA1161Q6NSJ0 714 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 KIAA1211LQ6NV74 962 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 NOXRED1Q6NXP6 359 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FDX2Q6P4F2 183 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 AGTRAPQ6RW13 159 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 USP51Q70EK9 711 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SYT13Q7L8C5 426 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 CAMKMTQ7Z624 323 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 UBE3DQ7Z6J8 389 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 THOC6Q86W42 341 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 HIPK1Q86Z02 1210 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 EPHX4Q8IUS5 362 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ERI1Q8IV48 349 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 MCATQ8IVS2 390 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 SLC22A15Q8IZD6 547 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZNF786Q8N393 782 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZCCHC7Q8N3Z6 543 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 NATD1Q8N6N6 113 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 CELF2-AS1Q8N7Q2 184 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FRMD1Q8N878 549 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SUMF1Q8NBK3 374 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZNF555Q8NEP9 628 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 OR8J2Q8NGG1 315 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 OR56A3Q8NH54 315 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 OR10A6Q8NH74 314 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 OR5K1Q8NHB7 308 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 ZNF420Q8TAQ5 688 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 MAGEE2Q8TD90 523 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 GANCQ8TET4 914 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SETD7Q8WTS6 366 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 CYGBQ8WWM9 190 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FIG4Q92562 907 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FAM131CQ96AQ9 280 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 AP2M1Q96CW1 435 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 WDR34Q96EX3 536 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 NRBF2Q96F24 287 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SLC47A1Q96FL8 570 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 SCARF2Q96GP6 870 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 PYURFQ96I23 114 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 FAM46AQ96IP4 442 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 VPS50Q96JG6 964 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 LINC00615Q96LM1 132 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 SEPHS2Q99611 448 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 RBM4BQ9BQ04 359 aaKnown RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 CPPED1Q9BRF8 314 aaPredicted RBP5.52□□□□□ -1.53
SDF2-206ENST00000587788 EFCAB11Q9BUY7 163 aa5.52□□□□□ -1.53
SDF2-206ENST00000587788 RBM4Q9BWF3 364 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms