RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 UBE3DQ7Z6J8 389 aa19.49■□□□□ 0.71
ATG4D-204ENST00000586417 SLC22A18Q96BI1 424 aa19.49■□□□□ 0.71
ATG4D-204ENST00000586417 RSRC1Q96IZ7 334 aaKnown RBP19.49■□□□□ 0.71
ATG4D-204ENST00000586417 ZNF583Q96ND8 569 aa19.49■□□□□ 0.71
ATG4D-204ENST00000586417 IRF2BPLQ9H1B7 796 aa19.49■□□□□ 0.71
ATG4D-204ENST00000586417 REEP4Q9H6H4 257 aa19.49■□□□□ 0.71
ATG4D-204ENST00000586417 RFXANKO14593 260 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 NDUFS4O43181 175 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 GSNP06396 782 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 FURINP09958 794 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 MYF5P13349 255 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 GRK3P35626 688 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 VHLP40337 213 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 TAS2R50P59544 299 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 PAQR7Q86WK9 346 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 AURKBQ96GD4 344 aaPredicted RBP19.48■□□□□ 0.71
ATG4D-204ENST00000586417 OR2A14Q96R47 310 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 PHOX2BQ99453 314 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 PARD6AQ9NPB6 346 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 SNX7Q9UNH6 387 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 SNX13Q9Y5W8 968 aa19.48■□□□□ 0.71
ATG4D-204ENST00000586417 LRIT2A6NDA9 550 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 AQP12BA6NM10 295 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 GSTM2P28161 218 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 AHRP35869 848 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 GRIA3P42263 894 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 MC1RQ01726 317 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 HYAL2Q12891 473 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 OGFOD3Q6PK18 319 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 IKBIPQ70UQ0 350 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 ZNF761Q86XN6 746 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-204ENST00000586417 AQP12AQ8IXF9 295 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 CLECL1Q8IZS7 167 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 TMEM132CQ8N3T6 1108 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 ARL14Q8N4G2 192 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 SLCO4A1Q96BD0 722 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 CCDC115Q96NT0 180 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 GBP5Q96PP8 586 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 PRPF18Q99633 342 aaKnown RBP19.47■□□□□ 0.71
ATG4D-204ENST00000586417 SH3GL1Q99961 368 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 PIF1Q9H611 641 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 SEMA4GQ9NTN9 838 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 PCDHB3Q9Y5E6 796 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 PCDHGA4Q9Y5G9 962 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 AP1M2Q9Y6Q5 423 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 OR6C74A6NCV1 312 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 STAMBPO95630 424 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 IL3P08700 152 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 UGT2B7P16662 529 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 C2orf80Q0P641 193 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 MUM1Q2TAK8 710 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 ADPRMQ3LIE5 342 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 C6orf132Q5T0Z8 1188 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 C17orf82Q86X59 251 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-204ENST00000586417 PQLC1Q8N2U9 271 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 RGMAQ96B86 450 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 LRGUKQ96M69 825 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 THUMPD3Q9BV44 507 aaKnown RBP19.47■□□□□ 0.71
ATG4D-204ENST00000586417 BHLHE41Q9C0J9 482 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-204ENST00000586417 KAT8Q9H7Z6 458 aaKnown RBP19.47■□□□□ 0.71
ATG4D-204ENST00000586417 NCDNQ9UBB6 729 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 BTNL2Q9UIR0 455 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 C15orf41Q9Y2V0 281 aa19.47■□□□□ 0.71
ATG4D-204ENST00000586417 RIF1Q5UIP0 2472 aaKnown RBP19.46■□□□□ 0.71
ATG4D-204ENST00000586417 ASCC3Q8N3C0 2202 aaKnown RBP19.46■□□□□ 0.71
ATG4D-204ENST00000586417 FAM221BA6H8Z2 402 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 PPM1DO15297 605 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 CAPN5O15484 640 aaPredicted RBP19.46■□□□□ 0.71
ATG4D-204ENST00000586417 YKT6O15498 198 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 NCK1P16333 377 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 HHEXQ03014 270 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 CCNYL2Q5T2Q4 361 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 PAGE2Q7Z2X7 111 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 TRIM73Q86UV7 250 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 SPPL2CQ8IUH8 684 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 SLC35F3Q8IY50 421 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 LILRA2Q8N149 483 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 C10orf111Q8N326 155 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 MFSD9Q8NBP5 474 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 OR10A6Q8NH74 314 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 MTERF3Q96E29 417 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 PANX1Q96RD7 426 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 ECSITQ9BQ95 431 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 TRIM15Q9C019 465 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 ACTR10Q9NZ32 417 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 NLGN3Q9NZ94 848 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 C6orf203Q9P0P8 240 aaPredicted RBP19.46■□□□□ 0.71
ATG4D-204ENST00000586417 SH3BP4Q9P0V3 963 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 ADAM29Q9UKF5 820 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 AP3M1Q9Y2T2 418 aa19.46■□□□□ 0.71
ATG4D-204ENST00000586417 ASXL3Q9C0F0 2248 aa19.45■□□□□ 0.7
ATG4D-204ENST00000586417 OR2A25A4D2G3 310 aa19.45■□□□□ 0.7
ATG4D-204ENST00000586417 CDX4O14627 284 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-204ENST00000586417 CASQ2O14958 399 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-204ENST00000586417 TNFSF14O43557 240 aa19.45■□□□□ 0.7
ATG4D-204ENST00000586417 POLR2CP19387 275 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-204ENST00000586417 EFNA1P20827 205 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-204ENST00000586417 TGM1P22735 817 aa19.45■□□□□ 0.7
ATG4D-204ENST00000586417 SLC7A1P30825 629 aa19.45■□□□□ 0.7
ATG4D-204ENST00000586417 RPL3P39023 403 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms