RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 ERV3-1Q14264 604 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 COL28A1Q2UY09 1125 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 CES4AQ5XG92 561 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 CDYL2Q8N8U2 506 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 TRMOQ9BU70 441 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 NPLQ9BXD5 320 aaPredicted RBP20.46■□□□□ 0.87
TSEN54-208ENST00000583173 ZNF717Q9BY31 904 aaPredicted RBP20.46■□□□□ 0.87
TSEN54-208ENST00000583173 SLC29A3Q9BZD2 475 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 KCNK9Q9NPC2 374 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 NXT1Q9UKK6 140 aaKnown RBP20.46■□□□□ 0.87
TSEN54-208ENST00000583173 ITPR1Q14643 2758 aa20.46■□□□□ 0.87
TSEN54-208ENST00000583173 SCELO95171 688 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 PDYNP01213 254 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 ENO1P06733 434 aaKnown RBP20.45■□□□□ 0.86
TSEN54-208ENST00000583173 ARRB2P32121 409 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 FOXA1P55317 472 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 CXADRP78310 365 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 KLC1Q07866 573 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 GALNT1Q10472 559 aaPredicted RBP20.45■□□□□ 0.86
TSEN54-208ENST00000583173 ASPHQ12797 758 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 TTMPQ5BVD1 217 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 CFAP157Q5JU67 520 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 TCHHL1Q5QJ38 904 aaPredicted RBP20.45■□□□□ 0.86
TSEN54-208ENST00000583173 ATP1A1-AS1Q5TC04 95 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 ZNF793Q6ZN11 406 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 ZSCAN1Q8NBB4 408 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 SRFBP1Q8NEF9 429 aaKnown RBP20.45■□□□□ 0.86
TSEN54-208ENST00000583173 METTL6Q8TCB7 284 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 MIEF2Q96C03 454 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 TBCDQ9BTW9 1192 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 MID1IP1Q9NPA3 183 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 LANCL2Q9NS86 450 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 KCMF1Q9P0J7 381 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 SNX6Q9UNH7 406 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 PADI2Q9Y2J8 665 aa20.45■□□□□ 0.86
TSEN54-208ENST00000583173 A0A0G2JN53 185 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 TMEM120BA0PK00 339 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 ZNF860A6NHJ4 632 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 FGF4P08620 206 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 ATXN8OSP0DMR3 200 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 IL10P22301 178 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 OCA2Q04671 838 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 CDC20Q12834 499 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 IFT88Q13099 833 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 DDX39BQ13838 428 aaKnown RBP20.44■□□□□ 0.86
TSEN54-208ENST00000583173 NUDCD3Q8IVD9 361 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 CA13Q8N1Q1 262 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 RGMAQ96B86 450 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 NACC2Q96BF6 587 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 PKNOX2Q96KN3 472 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 KCNC2Q96PR1 638 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 KCNA7Q96RP8 456 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 SOX17Q9H6I2 414 aaPredicted RBP20.44■□□□□ 0.86
TSEN54-208ENST00000583173 BRF2Q9HAW0 419 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 HCN3Q9P1Z3 774 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 TIMM22Q9Y584 194 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 CACNA1BQ00975 2339 aa20.44■□□□□ 0.86
TSEN54-208ENST00000583173 UQCRHLA0A096LP55 91 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 RTCAO00442 366 aaKnown RBP20.43■□□□□ 0.86
TSEN54-208ENST00000583173 PLPP1O14494 284 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 SH3BGRLO75368 114 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 JRKO75564 520 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 UQCRHP07919 91 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 ATP5A1P25705 553 aaKnown RBP20.43■□□□□ 0.86
TSEN54-208ENST00000583173 BSGP35613 385 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 ARL1P40616 181 aaPredicted RBP20.43■□□□□ 0.86
TSEN54-208ENST00000583173 FOLR3P41439 243 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 SKP1P63208 163 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 OLR1P78380 273 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 ZNF33BQ06732 778 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 TGM3Q08188 693 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 ARL13AQ5H913 290 aaPredicted RBP20.43■□□□□ 0.86
TSEN54-208ENST00000583173 TTC19Q6DKK2 380 aaPredicted RBP20.43■□□□□ 0.86
TSEN54-208ENST00000583173 OR4C11Q6IEV9 310 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 TRIM40Q6P9F5 258 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 GPR155Q7Z3F1 870 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 PPP1R32Q7Z5V6 425 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 SELENOMQ8WWX9 145 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 FAR2Q96K12 515 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 ATP6V1G3Q96LB4 118 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 SERINC2Q96SA4 455 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 SERPINI1Q99574 410 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 ELOVL6Q9H5J4 265 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 C14orf105Q9NVL8 296 aa20.43■□□□□ 0.86
TSEN54-208ENST00000583173 SAP18O00422 153 aaKnown RBP20.42■□□□□ 0.86
TSEN54-208ENST00000583173 ULK1O75385 1050 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 SEMA3DO95025 777 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 KRT6AP02538 564 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 KRT6BP04259 564 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 HIST1H1TP22492 207 aaPredicted RBP20.42■□□□□ 0.86
TSEN54-208ENST00000583173 MMP11P24347 488 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 SERPINB5P36952 375 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 TSFMP43897 325 aaKnown RBP20.42■□□□□ 0.86
TSEN54-208ENST00000583173 XCR1P46094 333 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 KRT6CP48668 564 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 HTR6P50406 440 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 MTTPP55157 894 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 PHEXP78562 749 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 RCN2Q14257 317 aa20.42■□□□□ 0.86
TSEN54-208ENST00000583173 ABRAXAS2Q15018 415 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms