RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 ADH1CP00326 375 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SDC1P18827 310 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
GGA3-214ENST00000582717 LIMK1P53667 647 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SLC14A1Q13336 389 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 GPM6BQ13491 265 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 GAB4Q2WGN9 574 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 PLEKHS1Q5SXH7 462 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 NEK5Q6P3R8 708 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 ETFBKMTQ8IXQ9 262 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 ZNF675Q8TD23 568 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 ELMO1Q92556 727 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 TSSK3Q96PN8 268 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 MYOCQ99972 504 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 P2RY13Q9BPV8 354 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 NDEL1Q9GZM8 345 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SLC32A1Q9H598 525 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 KLK4Q9Y5K2 254 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 LRRK1Q38SD2 2015 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 GFYI3L273 518 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 KMOO15229 486 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SPINT1O43278 529 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 PRMT3O60678 531 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 PDYNP01213 254 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 ENGP17813 658 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 CSTF3Q12996 717 aaKnown RBP13.09□□□□□ -0.31
GGA3-214ENST00000582717 EIF4HQ15056 248 aaKnown RBP13.09□□□□□ -0.31
GGA3-214ENST00000582717 TIMM50Q3ZCQ8 353 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SFTPA1Q8IWL2 248 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SLC22A15Q8IZD6 547 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 C9orf43Q8TAL5 461 aaPredicted RBP13.09□□□□□ -0.31
GGA3-214ENST00000582717 SETD6Q8TBK2 473 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 CSGALNACT1Q8TDX6 532 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 ZSCAN5AQ9BUG6 496 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 EHD3Q9NZN3 535 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 CFL2Q9Y281 166 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 SLC27A6Q9Y2P4 619 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
GGA3-214ENST00000582717 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 KPNA3O00505 521 aaPredicted RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 FPGTO14772 594 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 ELFN1P0C7U0 828 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 HLA-EP13747 358 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 PRPS1L1P21108 318 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 PTX3P26022 381 aaPredicted RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 C21orf33P30042 268 aaPredicted RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 PIK3CBP42338 1070 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 SLC6A12P48065 614 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 CTSCP53634 463 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 SRSF11Q05519 484 aaKnown RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 CPSF6Q16630 551 aaKnown RBP eCLIP13.08□□□□□ -0.32
GGA3-214ENST00000582717 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 LRRC70Q7Z2Q7 622 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 PTOV1Q86YD1 416 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 DEPDC4Q8N2C3 294 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 BTN2A2Q8WVV5 523 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 GGHQ92820 318 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 TP53INP1Q96A56 240 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 ELOVL6Q9H5J4 265 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 CERS4Q9HA82 394 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 FBXL12Q9NXK8 326 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 CRNNQ9UBG3 495 aaPredicted RBP13.08□□□□□ -0.32
GGA3-214ENST00000582717 DPP7Q9UHL4 492 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 TRAPPC4Q9Y296 219 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 COL4A3Q01955 1670 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 LOC100506127A0A0U1RQW1 187 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 MAGEB17A8MXT2 336 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 TSPAN6O43657 245 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 AP2A2O94973 939 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 ADORA3P0DMS8 318 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 SLC19A1P41440 591 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 RGS6P49758 472 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 OR2B6P58173 313 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 ST8SIA6P61647 398 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.08□□□□□ -0.32
GGA3-214ENST00000582717 SP140Q13342 867 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 ZNF284Q2VY69 593 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 PTCHD3Q3KNS1 767 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 IQCCQ4KMZ1 466 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 OR4F3Q6IEY1 312 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 GPR155Q7Z3F1 870 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 RASGRP3Q8IV61 690 aa13.08□□□□□ -0.32
GGA3-214ENST00000582717 RASGEF1AQ8N9B8 481 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms