RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 CTTNBP2NLQ9P2B4 639 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 RAI1Q7Z5J4 1906 aaPredicted RBP12.9□□□□□ -0.35
CSNK1D-213ENST00000580446 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 SMAPO00193 183 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 ANXA9O76027 345 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 P04436 131 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 CCKARP32238 428 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 MC3RP41968 323 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 TMED2Q15363 201 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 HECTD2Q5U5R9 776 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 KCTD11Q693B1 232 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 MEX3DQ86XN8 651 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF321PQ8N8H1 164 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 GSDMBQ8TAX9 411 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 INTS12Q96CB8 462 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 PDLIM2Q96JY6 352 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 SLCO5A1Q9H2Y9 848 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 SAMD15Q9P1V8 674 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
CSNK1D-213ENST00000580446 IGKV3D-11A0A0A0MRZ8 115 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 MBD3L3A6NE82 208 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 CST8O60676 142 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 ZFAND5O76080 213 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 JAK1P23458 1154 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 RBL1P28749 1068 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 CASP9P55211 416 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 KCNJ2P63252 427 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 VASNQ6EMK4 673 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 GPALPP1Q8IXQ4 340 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 OR9A1PQ8NGU1 263 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 MBD3L2Q8NHZ7 208 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 PKP4Q99569 1192 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 CCDC77Q9BR77 488 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 ANGPTL4Q9BY76 406 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 C12orf65Q9H3J6 166 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 CHODLQ9H9P2 273 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 PSD3Q9NYI0 1048 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF226Q9NYT6 803 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 MYOTQ9UBF9 498 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 SLC2A6Q9UGQ3 507 aa12.88□□□□□ -0.35
CSNK1D-213ENST00000580446 TGFBR3LH3BV60 316 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 LCMT2O60294 686 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 IL18BPO95998 194 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 IGHV4-39P01824 125 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 PGRP06401 933 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 ERGP11308 486 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 DPP4P27487 766 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 IDUAP35475 653 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 HK2P52789 917 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 PNLIPRP1P54315 467 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 THEMIS2Q5TEJ8 643 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 ADGRD1Q6QNK2 874 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF704Q6ZNC4 412 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 ASPGQ86U10 573 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 RASGEF1CQ8N431 466 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 MAGEC3Q8TD91 643 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 FAM111AQ96PZ2 611 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 UTP6Q9NYH9 597 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 ZFATQ9P243 1243 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
CSNK1D-213ENST00000580446 NCKAP5O14513 1909 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 UBFD1O14562 309 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 TRAPPC6AO75865 159 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 SMNDC1O75940 238 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■■■■□ 24.8
CSNK1D-213ENST00000580446 CCNDBP1O95273 360 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 GOT2P00505 430 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 ITGA2P17301 1181 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 IGFBP5P24593 272 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 GDF1P27539 372 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 GPR143P51810 404 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 MEI1Q5TIA1 1274 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 QSOX2Q6ZRP7 698 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF740Q8NDX6 193 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 SLC13A3Q8WWT9 602 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 CARD6Q9BX69 1037 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 RBSNQ9H1K0 784 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 ZFP64Q9NPA5 681 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNHIT6Q9NWK9 470 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 AIPL1Q9NZN9 384 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 GDF2Q9UK05 429 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 TRHDEQ9UKU6 1024 aa12.86□□□□□ -0.35
CSNK1D-213ENST00000580446 A8MXE2 369 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 KPNA5O15131 536 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 GALR3O60755 368 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 SERPIND1P05546 499 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms