RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 XCR1P46094 333 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 KRT6CP48668 564 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 LCP2Q13094 533 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 AP5B1Q2VPB7 878 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TTC19Q6DKK2 380 aaPredicted RBP13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 MRGPREQ86SM8 312 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ZC3H7AQ8IWR0 971 aaKnown RBP13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ARMC2Q8NEN0 867 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SREK1Q8WXA9 508 aaKnown RBP13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 RGMAQ96B86 450 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TBC1D20Q96BZ9 403 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 QRFPRQ96P65 431 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 F2RL3Q96RI0 385 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SERPINI1Q99574 410 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TRMOQ9BU70 441 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SLC29A3Q9BZD2 475 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 COPS7BQ9H9Q2 264 aaPredicted RBP13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 DMRT3Q9NQL9 472 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 PRDM7Q9NQW5 492 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 NMRK1Q9NWW6 199 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 P4HTMQ9NXG6 502 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 HCN3Q9P1Z3 774 aa13.13□□□□□ -0.31
SNORD3B-1-201ENST00000577988 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 A0A1W2PQ72 361 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 BLACEA4D250 179 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 MAGEB17A8MXT2 336 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TYROBPO43914 113 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SEMA3DO95025 777 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ESRRBO95718 433 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 HSD3B1P14060 373 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 HSD3B2P26439 372 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 PLA2G16P53816 162 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 NAGLUP54802 743 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SOX8P57073 446 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SNRPNP63162 240 aaKnown RBP13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 CASP8Q14790 479 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SYT16Q17RD7 645 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 LINC00303Q3SY05 128 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TMEM205Q6UW68 189 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 EXOC3L1Q86VI1 746 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 METTL21AQ8WXB1 218 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 EXTL1Q92935 676 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 CNDP1Q96KN2 507 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 FAM111AQ96PZ2 611 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 CDK15Q96Q40 435 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 MTERF1Q99551 399 aaKnown RBP13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ING2Q9H160 280 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 GSTO2Q9H4Y5 243 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ELOVL6Q9H5J4 265 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 BRF2Q9HAW0 419 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 LYRM4Q9HD34 91 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ACSS2Q9NR19 701 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 MKL2Q9ULH7 1088 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 HS3ST3B1Q9Y662 390 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 NUP210LQ5VU65 1888 aa13.12□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ZNF860A6NHJ4 632 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SOCS6O14544 535 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 TM9SF1O15321 606 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ALOX12BO75342 701 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SPAG7O75391 227 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 OR4F21O95013 312 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 FHP07954 510 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ACPPP15309 386 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ATP5A1P25705 553 aaKnown RBP13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 HMOX2P30519 316 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 SERPINB5P36952 375 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 RAB38P57729 211 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 GALNT1Q10472 559 aaPredicted RBP13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ATP1A4Q13733 1029 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 COL9A2Q14055 689 aaPredicted RBP13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 DCAF10Q5QP82 559 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 FAM69BQ5VUD6 431 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 LETMD1Q6P1Q0 360 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 KIRREL2Q6UWL6 708 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 UBE3DQ7Z6J8 389 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 C10orf107Q8IVU9 208 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 PRSS58Q8IYP2 241 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 CA13Q8N1Q1 262 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 ZCCHC7Q8N3Z6 543 aaKnown RBP13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 METTL6Q8TCB7 284 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
SNORD3B-1-201ENST00000577988 VN1R1Q9GZP7 353 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms