RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 VMP1Q96GC9 406 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 DACH2Q96NX9 599 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 CCL19Q99731 98 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 BPIFA3Q9BQP9 254 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 LIN28AQ9H9Z2 209 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 SAMD15Q9P1V8 674 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 ZNF223Q9UK11 482 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 EIF3LQ9Y262 564 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 PCDHGB3Q9Y5G1 929 aa13.05□□□□□ -0.32
PPP4R1-206ENST00000577779 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 IGKV3D-11A0A0A0MRZ8 115 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 PJA2O43164 708 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 ZNF189O75820 626 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 ZFAND5O76080 213 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 IL2RAP01589 272 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 ADRA1DP25100 572 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 DNASE1L1P49184 302 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 ZNF136P52737 540 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 FOXO1Q12778 655 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 HYAL4Q2M3T9 481 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 KLHL38Q2WGJ6 581 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 P3H1Q32P28 736 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 DEFB134Q4QY38 66 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 CTSL3PQ5NE16 218 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 KIAA0930Q6ICG6 404 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 RTL4Q6ZR62 310 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 AFAP1L2Q8N4X5 818 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 ZNF740Q8NDX6 193 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 NCLNQ969V3 563 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 AARSD1Q9BTE6 412 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 NECTIN3Q9NQS3 549 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 SPTLC3Q9NUV7 552 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 TUBA8Q9NY65 449 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 GTF3C3Q9Y5Q9 886 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 ABCA1O95477 2261 aa13.04□□□□□ -0.32
PPP4R1-206ENST00000577779 SH3D21A4FU49 640 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 PSMD12O00232 456 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 CASKO14936 926 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 PRKNO60260 465 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 LCMT2O60294 686 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 NIPSNAP2O75323 286 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 EPPINO95925 133 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 B3GALT4O96024 378 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 ALOX12P18054 663 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 TIMP3P35625 211 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 COPS2P61201 443 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 KRTAP1-1Q07627 177 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 DMTNQ08495 405 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 KCNJ11Q14654 390 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 TERF2Q15554 542 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 ACSF3Q4G176 576 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 HECTD2Q5U5R9 776 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 PPP1R21Q6ZMI0 780 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 LACC1Q8IV20 430 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 LRRC56Q8IYG6 542 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 SREK1Q8WXA9 508 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 KRT35Q92764 455 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 ISL2Q96A47 359 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 EPB41L4BQ9H329 900 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 CCDC177Q9NQR7 707 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 PNO1Q9NRX1 252 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 SACM1LQ9NTJ5 587 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 LMBRD1Q9NUN5 540 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 ZFATQ9P243 1243 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 TCAF1Q9Y4C2 921 aa13.03□□□□□ -0.32
PPP4R1-206ENST00000577779 DSCAMO60469 2012 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 WWP2O00308 870 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 NDUFS4O43181 175 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 PHF1O43189 567 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 WIPF1O43516 503 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 P04436 131 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 NUDT7P0C024 238 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 CHRM3P20309 590 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 FPR1P21462 350 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 FMO4P31512 558 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 GRK3P35626 688 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 AGFG1P52594 562 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 SIX1Q15475 284 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 NIPAL1Q6NVV3 410 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 MPP5Q8N3R9 675 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 SCYL1Q96KG9 808 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 BIRC8Q96P09 236 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 OSBPL8Q9BZF1 889 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 RHBGQ9H310 441 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 UBTD1Q9HAC8 227 aa13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 SEMA4BQ9NPR2 832 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-206ENST00000577779 MYOTQ9UBF9 498 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms