RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CARD8Q9Y2G2 431 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 OARD1Q9Y530 152 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM186AA6NE01 2351 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 A0A1B0GVC2 190 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 A6NIN4 97 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 CDH11P55287 796 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 PGBD5Q8N414 524 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 OR13F1Q8NGS4 319 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 KCNK12Q9HB15 430 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 CXXC1Q9P0U4 656 aaPredicted RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 TMEM98Q9Y2Y6 226 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 ZNF701M0R085 212 aaPredicted RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 NT5EP21589 574 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 ADRA1AP35348 466 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 STAT5AP42229 794 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 PSMD8P48556 350 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 SOWAHCQ53LP3 525 aaPredicted RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 ZNF655Q8N720 491 aaPredicted RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 OR6K6Q8NGW6 343 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 GATAD2BQ8WXI9 593 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 CXorf40BQ96DE9 158 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 MAELQ96JY0 434 aaKnown RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 IL17CQ9P0M4 197 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 H7BY64 318 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 B3GALT4O96024 378 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 ADH1AP07327 375 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 SDC1P18827 310 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 PTX3P26022 381 aaPredicted RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 TGFBR1P36897 503 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 KLHL22Q53GT1 634 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 DUS1LQ6P1R4 473 aaKnown RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 PRSS48Q7RTY5 328 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 AMIGO1Q86WK6 493 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 PRAP1Q96NZ9 151 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 THG1LQ9NWX6 298 aaKnown RBP17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 TAS2R7Q9NYW3 318 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 TRPS1Q9UHF7 1281 aa17.22■□□□□ 0.35
ATPAF1-214ENST00000576409 I6L893 689 aaPredicted RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 SLC31A1O15431 190 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 ATXN1LP0C7T5 689 aaKnown RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 CCND3P30281 292 aaPredicted RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 DGKGP49619 791 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 ZNF551Q7Z340 670 aaPredicted RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 B3GNT8Q7Z7M8 397 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 PAPD5Q8NDF8 572 aaKnown RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 TMEM80Q96HE8 168 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 SMURF1Q9HCE7 757 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 PCDHB11Q9Y5F2 797 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 FRRS1Q6ZNA5 592 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 MRPL48Q96GC5 212 aaKnown RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 PPP1R16AQ96I34 528 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 MAPKAP1Q9BPZ7 522 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 EFCAB11Q9BUY7 163 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 ACPTQ9BZG2 426 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 SIPA1L3O60292 1781 aaPredicted RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM170BA6NMN3 283 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 CRISP3P54108 245 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 MC1RQ01726 317 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 ZNF267Q14586 743 aaPredicted RBP17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 OR51G2Q8NGK0 314 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 OR8D1Q8WZ84 308 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 RFKQ969G6 155 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 RHBDF1Q96CC6 855 aa17.21■□□□□ 0.35
ATPAF1-214ENST00000576409 ERI3O43414 337 aaKnown RBP17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 CHST10O43529 356 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 ACP5P13686 325 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 MTHFD2P13995 350 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 HRH2P25021 359 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 IDUAP35475 653 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF763Q0D2J5 394 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 MAD2L1BPQ15013 274 aaPredicted RBP17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 SPIN4Q56A73 249 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 PRAMEF14Q5SWL7 426 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 PRAMEF13Q5VWM6 474 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 LINGO2Q7L985 606 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 HUS1BQ8NHY5 278 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 PEX13Q92968 403 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 C12orf66Q96MD2 445 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 ARNT2Q9HBZ2 717 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 DEC1Q9P2X7 70 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 ASB1Q9Y576 335 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 PRSS21Q9Y6M0 314 aa17.21■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3DA0A087WVF3 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3IA0A087WXS9 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3EA0A087X179 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3KA0A087X1G2 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3FA6NER0 549 aaPredicted RBP17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3LB9A6J9 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 IL3P08700 152 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3HP0C7X1 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 HLA-EP13747 358 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 VLDLRP98155 873 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3GQ6DHY5 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3CQ6IPX1 549 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 REEP3Q6NUK4 255 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 SPRED1Q7Z699 444 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TBC1D3Q8IZP1 549 aaPredicted RBP17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TNFAIP8L1Q8WVP5 186 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms