RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PEX11GQ96HA9 241 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 VPS39Q96JC1 886 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 C5orf34Q96MH7 638 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 PSMG3-AS1Q96PY0 264 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 LMF1Q96S06 567 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ELAC2Q9BQ52 826 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF700Q9H0M5 742 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 PLAC1Q9HBJ0 212 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 PLA2G3Q9NZ20 509 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 PLEKHB1Q9UF11 243 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 MID2Q9UJV3 735 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 NAALAD2Q9Y3Q0 740 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 PSAT1Q9Y617 370 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 LOC102723996A0A087X1L8 192 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 TRAV17A0A0B4J275 112 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 IGHV3-20A0A0C4DH32 117 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 A0A1W2PPM1 405 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 TRBC2A0A5B9 178 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 GOLGA8RI6L899 631 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 CDC7O00311 574 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 SNX3O60493 162 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 FAM155BO75949 473 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 DDAH2O95865 285 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 GSTA1P08263 222 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 PYGBP11216 843 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 NPPBP16860 134 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 SPRP35270 261 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 SOX11P35716 441 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 SLC18A2Q05940 514 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 HERC3Q15034 1050 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 CATSPEREQ5SY80 951 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 GRTP1Q5TC63 336 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 ATG16L1Q676U5 607 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 TMEM205Q6UW68 189 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 SBSNQ6UWP8 590 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 ABHD13Q7L211 337 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 CPEB2Q7Z5Q1 589 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 ZC3HC1Q86WB0 502 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 BCORP1Q8N888 145 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 CCDC63Q8NA47 563 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 ST6GALNAC3Q8NDV1 305 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 CATSPER1Q8NEC5 780 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 OR56A3Q8NH54 315 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 NEIL2Q969S2 332 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 TM4SF19Q96DZ7 209 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 VPS11Q9H270 941 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 PRM3Q9NNZ6 103 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 OLAHQ9NV23 265 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 TEKT2Q9UIF3 430 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 PRDM4Q9UKN5 801 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 NBPF19A0A087WUL8 3843 aa9.12□□□□□ -0.95
NPLOC4-216ENST00000574344 CROCCQ5TZA2 2017 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 A0A1W2PQ72 361 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 OR2W5A6NFC9 320 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 URADA6NGE7 173 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 NCF1BA6NI72 391 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 A8MUI8 341 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 NCF1CA8MVU1 366 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 WDR47O94967 919 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 CYC1P08574 325 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF888P0CJ79 500 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 RNF224P0DH78 156 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 NCF1P14598 390 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ALOX12P18054 663 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 TAC1P20366 129 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 HNF4AP41235 474 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 AGTR2P50052 363 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 EFNA3P52797 238 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 OLR1P78380 273 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ACTN3Q08043 901 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 BMPR2Q13873 1038 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ABRAXAS2Q15018 415 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 RBBP5Q15291 538 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 DEFB134Q4QY38 66 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 HIST2H2BCQ6DN03 193 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 TMEM207Q6UWW9 146 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 TRPM8Q7Z2W7 1104 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ANKRD37Q7Z713 158 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 PIGWQ7Z7B1 504 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ADAMTSL2Q86TH1 951 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 THOC6Q86W42 341 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 PDSS2Q86YH6 399 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF740Q8NDX6 193 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 ABHD11Q8NFV4 315 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 OR5T3Q8NGG3 340 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 PPP1R14CQ8TAE6 165 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 FAR1Q8WVX9 515 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 PSMF1Q92530 271 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 MOCOSQ96EN8 888 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 FAM111AQ96PZ2 611 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 OR4K3Q96R72 315 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 AIF1LQ9BQI0 150 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 UNKQ9C0B0 810 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 RASSF4Q9H2L5 321 aa9.11□□□□□ -0.95
NPLOC4-216ENST00000574344 SPNS1Q9H2V7 528 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms