RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GOLGA6L1Q8N7Z2 621 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 WDR20Q8TBZ3 569 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 METTL6Q8TCB7 284 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 APOBEC4Q8WW27 367 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SELENOMQ8WWX9 145 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 METTL21AQ8WXB1 218 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 RGMAQ96B86 450 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SMIM10Q96HG1 83 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 CNDP1Q96KN2 507 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 F2RL3Q96RI0 385 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SERINC2Q96SA4 455 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SERPINI1Q99574 410 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 TRMOQ9BU70 441 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SLC29A3Q9BZD2 475 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 KCNK9Q9NPC2 374 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 DMRT3Q9NQL9 472 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 AHSPQ9NZD4 102 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SLC17A7Q9P2U7 560 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 C3orf18Q9UK00 162 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SPACA6W5XKT8 324 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZZEF1O43149 2961 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZNF860A6NHJ4 632 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MAGEB17A8MXT2 336 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 IDSB3KWA1 339 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ERVH48-1M5A8F1 160 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 FFAR3O14843 346 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 GPR42O15529 346 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 CHST10O43529 356 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 CNOT3O75175 753 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ULK1O75385 1050 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 OR4F21O95013 312 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ESRRBO95718 433 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 RNH1P13489 461 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 H2AFXP16104 143 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 TSPAN8P19075 237 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 EMP2P54851 167 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 RPS13P62277 151 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZNF33BQ06732 778 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 CUL3Q13618 768 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 SYT16Q17RD7 645 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MINDY4Q4G0A6 757 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ADNP2Q6IQ32 1131 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 LETMD1Q6P1Q0 360 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 SHISA6Q6ZSJ9 500 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 FRMD7Q6ZUT3 714 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MED25Q71SY5 747 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 PRSS58Q8IYP2 241 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 TMEM102Q8N9M5 508 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 PPP1R14CQ8TAE6 165 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 ADAMTS17Q8TE56 1095 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 TBC1D20Q96BZ9 403 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MTFMTQ96DP5 389 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 PEX11GQ96HA9 241 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 C12orf65Q9H3J6 166 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 GSTO2Q9H4Y5 243 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 BRF2Q9HAW0 419 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 EML4Q9HC35 981 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MID1IP1Q9NPA3 183 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 C19orf25Q9UFG5 118 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MKL2Q9ULH7 1088 aa12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 G3BP2Q9UN86 482 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 MRPS33Q9Y291 106 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-206ENST00000573989 KMT2BQ9UMN6 2715 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 PPP6CO00743 305 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 UMODP07911 640 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 FHP07954 510 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 HSD3B1P14060 373 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 CREB1P16220 341 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 HSD3B2P26439 372 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 ALDH3A1P30838 453 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 SERPINB5P36952 375 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 SSR2P43308 183 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 NEK2P51955 445 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 TUBB8Q3ZCM7 444 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 ATP1A1-AS1Q5TC04 95 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 FAM69BQ5VUD6 431 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 OR4C11Q6IEV9 310 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 PAGE2Q7Z2X7 111 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 MRGPREQ86SM8 312 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 NUDCD3Q8IVD9 361 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZC3H7AQ8IWR0 971 aaKnown RBP12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 CDYL2Q8N8U2 506 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 AGAP11Q8TF27 550 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 UBL7Q96S82 380 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 AICDAQ9GZX7 198 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 OR51B5Q9H339 312 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 TMBIM4Q9HC24 238 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
TRAPPC1-206ENST00000573989 A0A0G2JN53 185 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 BLACEA4D250 179 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 SYNDIG1LA6NDD5 238 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 AGPSO00116 658 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 CLDN4O14493 209 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 BIRC5O15392 142 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 NPHS1O60500 1241 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 KLHL41O60662 606 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ALOX12BO75342 701 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms