RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SPASTQ9UBP0 616 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 TBC1D29Q9UFV1 150 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 APOBEC3BQ9UH17 382 aaKnown RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 XPO7Q9UIA9 1087 aaKnown RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 HAO1Q9UJM8 370 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 VPS28Q9UK41 221 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 MKLN1Q9UL63 735 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 CORO1CQ9ULV4 474 aaPredicted RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 ADAM18Q9Y3Q7 739 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 CSNK1G3Q9Y6M4 447 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 FBN1P35555 2871 aaKnown RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 CSPG4Q6UVK1 2322 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 FAM237BA0A1B0GVD1 139 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 GOLGA6L10A6NI86 522 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 AGAP14A8MT82 685 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 EIF3CLB5ME19 914 aaKnown RBP5.17□□□□□ -1.58
SF3B3-214ENST00000572365 USP17L23D6RBM5 183 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 LMO7DNF2Z398 122 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 K7ERQ8 282 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 AP3D1O14617 1153 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CHUKO15111 745 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 LRRTM2O43300 516 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 MOCS2O96007 188 aaPredicted RBP5.17□□□□□ -1.58
SF3B3-214ENST00000572365 MT-CYBP00156 380 aaPredicted RBP5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ENO3P13929 434 aaPredicted RBP5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CTSEP14091 401 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CCKBRP32239 447 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CDAP32320 146 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CXCR3P49682 368 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CCL11P51671 97 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 EIF3IQ13347 325 aaKnown RBP5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CDH18Q13634 790 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 DLG2Q15700 870 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ALG11Q2TAA5 492 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF699Q32M78 642 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 FILIP1LQ4L180 1135 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 DCAF6Q58WW2 860 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 TMEM71Q6P5X7 295 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 VPS36Q86VN1 386 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 PARGQ86W56 976 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 DENND6AQ8IWF6 608 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ARHGAP12Q8IWW6 846 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 LGI2Q8N0V4 545 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 TTC39CQ8N584 583 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CEP112Q8N8E3 955 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 OR8D1Q8WZ84 308 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 STARD8Q92502 1023 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 RAD54LQ92698 747 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 SNAPC3Q92966 411 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 SLC45A3Q96JT2 553 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CATSPER2Q96P56 530 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ULBP1Q9BZM6 244 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CCDC68Q9H2F9 335 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 KLHL31Q9H511 634 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 MAP6D1Q9H9H5 199 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 APMAPQ9HDC9 416 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ASF1BQ9NVP2 202 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ABI3Q9P2A4 366 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 CTNNAL1Q9UBT7 734 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ITM2BQ9Y287 266 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 FAM96BQ9Y3D0 163 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 MN1Q10571 1320 aaPredicted RBP5.17□□□□□ -1.58
SF3B3-214ENST00000572365 ABCA4P78363 2273 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 LRP4O75096 1905 aa5.17□□□□□ -1.58
SF3B3-214ENST00000572365 IGHV5-10-1A0A0J9YXX1 117 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 GAGE12JA6NER3 117 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 A6NL46 340 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 YJEFN3A6XGL0 299 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 HSPB2A8KAH6 182 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 B4DGG1 531 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 E7ENQ6 273 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 TMX2-CTNND1H3BSU7 103 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 ADAM10O14672 748 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 SEC14L5O43304 696 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 SMAD6O43541 496 aaKnown RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 ACSL4O60488 711 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 CLDN7O95471 211 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 SRPRAP08240 638 aaKnown RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 PRR35P0CG20 571 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 EZRP15311 586 aaKnown RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 KELP23276 732 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 HADHAP40939 763 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 UBA7P41226 1012 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 MAGEA8P43361 318 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 TKTL1P51854 596 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 THOP1P52888 689 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 SH3BGRP55822 239 aaPredicted RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 SLC8A3P57103 927 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 SSBP2P81877 361 aaPredicted RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 CSTF3Q12996 717 aaKnown RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 OLIG2Q13516 323 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 CUL4AQ13619 759 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 RAPSNQ13702 412 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 RUNX2Q13950 521 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 FGFBP1Q14512 234 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 ELAVL3Q14576 367 aaKnown RBP5.16□□□□□ -1.58
SF3B3-214ENST00000572365 TOMM20Q15388 145 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 HSPB2Q16082 182 aa5.16□□□□□ -1.58
SF3B3-214ENST00000572365 BSPRYQ5W0U4 402 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms