RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CCRL2O00421 344 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 PRRG1O14668 218 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 IDH3BO43837 385 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 TNFRSF21O75509 655 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 AZGP1P25311 298 aaKnown RBP16.74■□□□□ 0.27
SCARF1-205ENST00000571272 CNR2P34972 360 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 PTPN5P54829 565 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 VEPH1Q14D04 833 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 ZMAT1Q5H9K5 638 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 FAM180BQ6P0A1 224 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 RNF130Q86XS8 419 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 FAM217AQ8IXS0 508 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 ASZ1Q8WWH4 475 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 COQ8BQ96D53 544 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 VPS35Q96QK1 796 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF334Q9HCZ1 680 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF221Q9UK13 617 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 RAB23Q9ULC3 237 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 TBC1D24Q9ULP9 559 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 MN1Q10571 1320 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-205ENST00000571272 SLC16A5O15375 505 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 GADD45GO95257 159 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 SLC16A8O95907 504 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 GASTP01350 101 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 FEN1P39748 380 aaKnown RBP16.74■□□□□ 0.27
SCARF1-205ENST00000571272 SOX3P41225 446 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 C21orf58P58505 322 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 GRHL2Q6ISB3 625 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 Q6ZNB5 142 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 PIK3R3Q92569 461 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 C11orf16Q9NQ32 467 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 STOX2Q9P2F5 926 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-205ENST00000571272 HCN4Q9Y3Q4 1203 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 MYOFQ9NZM1 2061 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 H0YIV9 168 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 UGDHO60701 494 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 SLC10A3P09131 477 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 CHMP24386 653 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 TGM4P49221 684 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 NDUFA5Q16718 116 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 DPY19L3Q6ZPD9 716 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 CHTF18Q8WVB6 975 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 MAGEB10Q96LZ2 347 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-205ENST00000571272 DMRTB1Q96MA1 342 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 MUTYHQ9UIF7 546 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 RNASET2O00584 256 aaKnown RBP16.73■□□□□ 0.27
SCARF1-205ENST00000571272 CCNB2O95067 398 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 SNX4O95219 450 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF8P17098 575 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-205ENST00000571272 TIA1P31483 386 aaKnown RBP eCLIP16.73■□□□□ 0.273e-6■■□□□ 11.6
SCARF1-205ENST00000571272 RPS19P39019 145 aaKnown RBP16.73■□□□□ 0.27
SCARF1-205ENST00000571272 HNF4AP41235 474 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 HTR3AP46098 478 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 CDK6Q00534 326 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 SLC5A12Q1EHB4 618 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 ATAD3CQ5T2N8 411 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 KLHL17Q6TDP4 642 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 TMPRSS11BQ86T26 416 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 OR6F1Q8NGZ6 308 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 PIP5K1AQ99755 562 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 CDCA4Q9BXL8 241 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 ASPNQ9BXN1 380 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 RRAGCQ9HB90 399 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 CLEC2DQ9UHP7 191 aa16.73■□□□□ 0.27
SCARF1-205ENST00000571272 EFCAB10A6NFE3 127 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 SGTAO43765 313 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 PTPN2P17706 415 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 ETV6P41212 452 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 CYP4F8P98187 520 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 TIMM50Q3ZCQ8 353 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 CHST14Q8NCH0 376 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 GPR151Q8TDV0 419 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 MYLIPQ8WY64 445 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 OR2A14Q96R47 310 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 NDEL1Q9GZM8 345 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 CLN6Q9NWW5 311 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 KRT75O95678 551 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 CKMP06732 381 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 IGFBP1P08833 259 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-205ENST00000571272 ITGA2P17301 1181 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 SOAT1P35610 550 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 CHI3L1P36222 383 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-205ENST00000571272 PLAG1Q6DJT9 500 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 TMC5Q6UXY8 1006 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 NANOGNBQ7Z5D8 188 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 CMTM8Q8IZV2 173 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 TAGAPQ8N103 731 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 C9orf43Q8TAL5 461 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-205ENST00000571272 NEIL2Q969S2 332 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 ECHDC3Q96DC8 303 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
SCARF1-205ENST00000571272 MCCC1Q96RQ3 725 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-205ENST00000571272 ZIC5Q96T25 663 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 PKP4Q99569 1192 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 SMURF1Q9HCE7 757 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 C1GALT1Q9NS00 363 aa16.72■□□□□ 0.27
SCARF1-205ENST00000571272 WWP2O00308 870 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 ENTPD6O75354 484 aa16.71■□□□□ 0.27
SCARF1-205ENST00000571272 ABLIM3O94929 683 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms