RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TUBB6Q9BUF5 446 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 ZNF700Q9H0M5 742 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 ACTR8Q9H981 624 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 TMEM216Q9P0N5 145 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 TSC22D4Q9Y3Q8 395 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 PCDHGA11Q9Y5H2 935 aa13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 HELZ2Q9BYK8 2649 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-218ENST00000569569 A0A0G2JN53 185 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 MAGEB17A8MXT2 336 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 PSMD12O00232 456 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 B3GALT2O43825 422 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 B4GALT2O60909 372 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 SERPINA7P05543 415 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 GSTA1P08263 222 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 SBK3P0C264 359 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 TAC1P20366 129 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 VSNL1P62760 191 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 AP2B1P63010 937 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 RUNX2Q13950 521 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 NSDHLQ15738 373 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 WDR93Q6P2C0 686 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 ABHD17CQ6PCB6 329 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 RIPOR1Q6ZS17 1223 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 CHSY3Q70JA7 882 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 ANKRD37Q7Z713 158 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 TDRPQ86YL5 185 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 MYLK4Q86YV6 388 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 L3MBTL4Q8NA19 623 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 MZB1Q8WU39 189 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 TM9SF4Q92544 642 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 ATP6V1E2Q96A05 226 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 REPS1Q96D71 796 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 CMTM7Q96FZ5 175 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 IMMP1LQ96LU5 166 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 QRFPRQ96P65 431 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 F2RL3Q96RI0 385 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 SERINC2Q96SA4 455 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 NTMT1Q9BV86 223 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 MS4A8Q9BY19 250 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 RBCK1Q9BYM8 510 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 ROGDIQ9GZN7 287 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 NOL11Q9H8H0 719 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 PRDM7Q9NQW5 492 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 DCDC2Q9UHG0 476 aa13.01□□□□□ -0.33
HERPUD1-218ENST00000569569 H0YIV9 168 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 GOLGA8RI6L899 631 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 J3QKU1 62 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 PRMT3O60678 531 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 CLDN9O95484 217 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 TGFB1P01137 390 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 PRR35P0CG20 571 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 PYGBP11216 843 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 HSD17B3P37058 310 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 PIK3CBP42338 1070 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 CCNG1P51959 295 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 MTTPP55157 894 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 ABRAXAS2Q15018 415 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 RASA2Q15283 850 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 CPSF6Q16630 551 aaKnown RBP eCLIP13□□□□□ -0.33
HERPUD1-218ENST00000569569 NADK2Q4G0N4 442 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 TMEM35AQ53FP2 167 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 DEPDC1Q5TB30 811 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 QSOX2Q6ZRP7 698 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 ZADH2Q8N4Q0 377 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 RBMXL3Q8N7X1 1067 aaKnown RBP13□□□□□ -0.33
HERPUD1-218ENST00000569569 HUS1BQ8NHY5 278 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 PTCHD1Q96NR3 888 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 KCNC2Q96PR1 638 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 LMF1Q96S06 567 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 TBCDQ9BTW9 1192 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 C1QTNF3Q9BXJ4 246 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 EPN3Q9H201 632 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 COPS7BQ9H9Q2 264 aaPredicted RBP13□□□□□ -0.33
HERPUD1-218ENST00000569569 ZBTB26Q9HCK0 441 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 PCTPQ9UKL6 214 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 RNF11Q9Y3C5 154 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
HERPUD1-218ENST00000569569 CROCCQ5TZA2 2017 aa13□□□□□ -0.33
HERPUD1-218ENST00000569569 IGHV3-20A0A0C4DH32 117 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 A0A1W2PPM1 405 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 A8MT66 165 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 OR7A17O14581 309 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 CDH16O75309 829 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 RPS17P08708 135 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 KRT15P19012 456 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 ARL1P40616 181 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 SLCO1A2P46721 670 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 RAB38P57729 211 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 BTG2P78543 158 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 PHEXP78562 749 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 TLE1Q04724 770 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 ACTN3Q08043 901 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 DDX39BQ13838 428 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 RCN2Q14257 317 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 AP5B1Q2VPB7 878 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 CRB2Q5IJ48 1285 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms