RNA–Protein interactions for RNA: ENST00000569376.5

TNRC6A-217, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 610 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-217ENST00000569376 UCK2Q9BZX2 261 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 SLC7A5P2Q9GIP4 190 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 WDR54Q9H977 334 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 SMARCAL1Q9NZC9 954 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 IL1RAPL1Q9NZN1 696 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 IFT80Q9P2H3 777 aaPredicted RBP4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 GPR160Q9UJ42 338 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 CDC42EP3Q9UKI2 254 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 RIMKLBQ9ULI2 386 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 TFR2Q9UP52 801 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 TRAF6Q9Y4K3 522 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 EPN1Q9Y6I3 576 aaPredicted RBP4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 DUSP10Q9Y6W6 482 aa4.79□□□□□ -1.64
TNRC6A-217ENST00000569376 TGP01266 2768 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 ARID1AO14497 2285 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 IGLV3-12A0A075B6K2 115 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 A0A1W2PQ72 361 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CCDC162PA2VCL2 907 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 ERI2A8K979 691 aaKnown RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TARM1B6A8C7 271 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 DSCR3O14972 297 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SHOXO15266 292 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TLX2O43763 284 aaPredicted RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 OR1I1O60431 355 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SMPD2O60906 423 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CLEC3AO75596 197 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 PPM1BO75688 479 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 KLHL18O94889 574 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SUN1O94901 812 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FTH1P02794 183 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TPOP07202 933 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FAM157CP0CG43 387 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 PIM1P11309 404 aaPredicted RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CD9P21926 228 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 MSNP26038 577 aaKnown RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 STIP1P31948 543 aaKnown RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CCR7P32248 378 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CETN2P41208 172 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 KIR2DL3P43628 341 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 RWDD2BP57060 319 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FOXL2P58012 376 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 RNF4P78317 190 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TFF3Q07654 80 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 DMTNQ08495 405 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 MFAP5Q13361 173 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 ZNF267Q14586 743 aaPredicted RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TOMM20Q15388 145 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SPA17Q15506 151 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SF1Q15637 639 aaKnown RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FAM214AQ32MH5 1076 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 DNAJC21Q5F1R6 531 aaKnown RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TCTE1Q5JU00 501 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 C1orf189Q5VU69 101 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 AADACL2Q6P093 401 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FBXO42Q6P3S6 717 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 PGM2L1Q6PCE3 622 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 POMZP3Q6PJE2 187 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FIGLAQ6QHK4 219 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 ARSKQ6UWY0 536 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 RNF111Q6ZNA4 994 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 LINC00696Q6ZRV3 163 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CEP128Q6ZU80 1094 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 COX15Q7KZN9 410 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 LINC00523Q86TU6 105 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 HOOK3Q86VS8 718 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 VRK3Q8IV63 474 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FAM71DQ8N9W8 422 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 LMNTD1Q8N9Z9 388 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 ZBTB34Q8NCN2 500 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 OR11G2Q8NGC1 345 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 OR13J1Q8NGT2 312 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 OR2L8Q8NGY9 312 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 HMGCLL1Q8TB92 370 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 AGAP11Q8TF27 550 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 ROBO4Q8WZ75 1007 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 PSMF1Q92530 271 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 DLG3Q92796 817 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 N4BP2L2Q92802 583 aaPredicted RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 DIO2Q92813 273 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 PEX13Q92968 403 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 HDAC10Q969S8 669 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SLC22A18Q96BI1 424 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 VPS50Q96JG6 964 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CCDC138Q96M89 665 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 KCNC2Q96PR1 638 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 FAM118BQ9BPY3 351 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 HGH1Q9BTY7 390 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 LHPPQ9H008 270 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 LRRC40Q9H9A6 602 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 SLC6A20Q9NP91 592 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 TXLNGQ9NUQ3 528 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 CGGBP1Q9UFW8 167 aaPredicted RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 GPR52Q9Y2T5 361 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 REXO2Q9Y3B8 237 aaKnown RBP4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 PCDHA9Q9Y5H5 950 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 HS3ST3B1Q9Y662 390 aa4.78□□□□□ -1.64
TNRC6A-217ENST00000569376 MPDZO75970 2070 aa4.77□□□□□ -1.65
TNRC6A-217ENST00000569376 A0A1B0GVC2 190 aa4.77□□□□□ -1.65
TNRC6A-217ENST00000569376 A0A1B0GX78 115 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms